YALI0E21153g

Overview

Description similar to uniprot|Q02724 Saccharomyces cerevisiae YPL020c ULP1 Ubl-specific protease
Locus type CDS
Locus tag YALI0E21153g

Location

Species Yarrowia lipolytica Positions 2516308..2518537
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 2230 (nuc.)
Previous locus YALI0E21131g Next locus YALI0E21175g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E21153g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E21153gYALI0E21153g_mRNA-001YALI0E21153g_CDS-001

Nucleotide sequence

 

>YALI0E21153g
ATGACGTCGCTGTACTCGGGGAACCTGCCGAAATTCGATCCCCAACAACCACGATACAAC
GGAACGCGCAAAACAAGCCACTACGACAGTCTGCGCAAAGATAGCAACTCTCACCACGAC
GACCCCTTCAACCCCTCCACTAACCGCCCAGACCGCGTCTTTACCCCCAATAAGAGCCTT
GTCAGCTATAGAGACGACTTTCCGCGCCAGCAGGTACAAGAGCGGACCTTTTCGGGCAAC
AAAGGCGCTCTCGATCTACCTCTACACGGCTCTCTGACGGCTAACCAGAAACGGTCCTAT
CTCGAGGCATTCAACGTGATAGGAGAAACAGGACATTCAAAACCGCCACCTCAGTCTCTG
TACTACCAGCCCGAAGATAACTCGCTGCTGGCTGTACAAAACCACTTTGATCCCATTGTC
GATCATCCCACCATGGATACAGTCAAACATATTGCTCTGGAGGCGTGCAAGAACCTGTGG
AGAGGCACCAGTCTGCTGTTTTTCGCGCTCAGAGCCAGTGTGGCCTTTGCATACAATGCA
GTATATACCTCCGACACCAAACGACGCAGGGTGTCGAATCCCAACACGAATCAGGGCGAG
TTCGCAGAATCAGACGCCAGACTGAACCACTACCTGGCCCAAAACGCCCATGAAGAGGGC
CAGGACGTGGAACTGGAGATTATCGGATCTCGACAGGTGGAACAGTACCCTAGTCGAGTC
CCTGGAGCCTTTGTGGACCATCAATACGACGACTATTATTCCAAGGCTGCTCCCGAGCAA
ATGAGAGCCGCCAAGGCAAGCACATCGGTCCAGGAGCCACCACAGGCGCACCTGAGGTCG
TCCAACAACAGTTACGACGATTCGCTGCATTTCAACGGCTCCTTTGCCGCTTCCTCACCT
CATTTCAAACCCAGCAAGTCGCTGCAAGACGAATTTGAGTCTATCGACGCCTCCAACCAG
TCCTTCACTCCCATGAAGCTGCCCAAGCGAACTGCGGCTTCTACTGTAGCGGCCGAAAAC
GTTCTCAAGCCAAACAGAGTGCCTTCCTATGGTACCACATTTCTGCAGAGACCTCTCGAA
GGCCCTGTTGTCGGCCAGAAGCCCAACAAGAAGTTCACCGAGCGTCTTTACAACGCCTTT
TCCGGAAACTACAAGCCTCCCCCTACGGTTGTGCCTGAAACATCGTTTGATGCGTCTCAT
CTGGAGTCTCAGGATCGAACTCAGTCTGTTTTCTCTGCTTGGAGCAACAAATCCGGTGCT
GTTGACCATGATGATGAGGTGGAGGATGCCAGGCAGAGACACGCTGCCCAACTGTACCGA
CAACACCAGGCTGAGCTGGAGCAATCACTGCAGGAGGCTTCTCGGATGGACTTCAAGGAA
TCCTACGAGGTGCTGGAGGCCCGACGACAGCAGATCCAGGAACAGATTGAGCGACAAAAG
GCCCAGGCCGAGGGCCGACCGGTGCGAAGTAAGAAGGCACCCGGAGCGTTTTTGGACCTG
ACGTCCGAGCAGCTCAAACAGGTCGACGACCTGTGGCGGTCTTCGCCTCACAATGTGATC
ATCGACAAGTTCCGAATTGATCTCAAGGGCGACGATATCCACAAGCTCAAGGACGGCCGA
TGGCTCAACGACAACGTGATCAACTTTTACTTCGCCATGATCACCGAGCGGTCCAAGAAG
GCAGAGGGAAAGTTGCCAGTCATTGGGTGCATGGTTACGCAGTTCTTCAAAAACCTGCAG
GAAAAGGGCTACTCTGGGGTTGCCCGATGGGCCAAGAGAGCCGGAATCGACGTAACAAAG
GCCGATTACGTCTTTTTCCCTCTCAACTTGAACAACAACCATTGGTGTTTGGCCGTTTTG
GATAACGTCAATAAGCAGATTCGACAGCACGACTCCCTTAACGGAGACGGAACTAGAAAC
CTGCACATCATCAAGGACTATCTTCGTCAGGAGGCCGAGAAGATGCATCCAGGTTCGGGG
GGTATGTTTGACGAGTACGAGATTGTGCCTCGAGCAGAGTCCCCCCAGCAGTTTAATGGA
GTTGACTGTGGTGTGTTCACGTGTCAGAACATCGAGCTCATGGCGCGAAACGCCCCTCTC
AACTACTCACAGGAGGATATGCCTACGATTAGAAGGCGAATCGTATATGAGGTTTGTACG
GCAGAGTTTCTGACTCATGCCCAGGGTAAGCTATAATCTATGGCGATAATGTATATTTTT
ATTCATGGCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E21153g_CDS-001

Protein length: 732 aa.
Product: Protease that specifically cleaves Smt3p protein conjugates, putative

>YALI0E21153g_CDS-001 MTSLYSGNLPKFDPQQPRYNGTRKTSHYDSLRKDSNSHHDDPFNPSTNRPDRVFTPNKSL
VSYRDDFPRQQVQERTFSGNKGALDLPLHGSLTANQKRSYLEAFNVIGETGHSKPPPQSL
YYQPEDNSLLAVQNHFDPIVDHPTMDTVKHIALEACKNLWRGTSLLFFALRASVAFAYNA
VYTSDTKRRRVSNPNTNQGEFAESDARLNHYLAQNAHEEGQDVELEIIGSRQVEQYPSRV
PGAFVDHQYDDYYSKAAPEQMRAAKASTSVQEPPQAHLRSSNNSYDDSLHFNGSFAASSP
HFKPSKSLQDEFESIDASNQSFTPMKLPKRTAASTVAAENVLKPNRVPSYGTTFLQRPLE
GPVVGQKPNKKFTERLYNAFSGNYKPPPTVVPETSFDASHLESQDRTQSVFSAWSNKSGA
VDHDDEVEDARQRHAAQLYRQHQAELEQSLQEASRMDFKESYEVLEARRQQIQEQIERQK
AQAEGRPVRSKKAPGAFLDLTSEQLKQVDDLWRSSPHNVIIDKFRIDLKGDDIHKLKDGR
WLNDNVINFYFAMITERSKKAEGKLPVIGCMVTQFFKNLQEKGYSGVARWAKRAGIDVTK
ADYVFFPLNLNNNHWCLAVLDNVNKQIRQHDSLNGDGTRNLHIIKDYLRQEAEKMHPGSG
GMFDEYEIVPRAESPQQFNGVDCGVFTCQNIELMARNAPLNYSQEDMPTIRRRIVYEVCT
AEFLTHAQGKL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG