YALI0E21131g

Overview

Description similar to uniprot|Q8NKG8 Kluyveromyces lactis SLD Putative delta 8-sphingolipid desaturase
Locus type CDS
Locus tag YALI0E21131g

Location

Species Yarrowia lipolytica Positions 2514049..2515760
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1712 (nuc.)
Previous locus YALI0E21109g Next locus YALI0E21153g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E21131g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E21131gYALI0E21131g_mRNA-001YALI0E21131g_CDS-001

Nucleotide sequence

 

>YALI0E21131g
ATGTCCTACAAGACCCGCAAAGAGGTGCTTCCGCGGTCGGAAATTGAGGCGCTCATCGCC
GACGGCCACCACATTGTCATCTACAACGGCAAGGTGCTCAAGCTGGACAACTGGCTCGAT
CGTCACCCTGGAGGAGACATGGCCATTTTCCACGTGGTTGGACGGGACGCCACCGACGAA
ATCAACGCATACCACAGCGACGAGGCCCTGGCCACCATGGGCGCCTACCAGATTGGAATC
ACTGGCGAAAAAATCTGGGAAAACTTTCTGCCACCTATCCAGGGAGGAGTGTTTCGAAAA
CGGGGCAGTATTGCTGCAGATGAGGGCATTTCGCTGTCCAGCAGCGCATCCAGCTCATCA
CAGGAGGCAGTGACTCAGAAACCCGCGCCCATTTTTACGAACGAACAAATTCTCAAGGCG
GAAAGACTTAAGCTCATCGAGGAGGACGAGAACAGACAGCTCCAGCATGACCTTGAAATC
TTTCCCTCTCTCGACTACAACACCCAGACGGAGATTGGAACAAAGTACAAGGCCCTGTAC
AAGCGTGTCGAGGACGCTGGCTTGTTTGAACCCAATTACAGAGGCTACTTCAGTGACTTT
CTTCGAATCTCTACCATGTTCAGTCTGTCATGGTACCTGTTTGACAAGTCCATGTTCCTC
TCCGCCATTTGTCTGGGCATGGGCTGGCACCAGCTAGTCTTCATTGCTCATGATGCCGGC
CACATTGGTATCACCCATGGCTACCAGATGGACAACTGGATCGGAATGACCATTGCCGCT
TGGATTGGAGGTCTGTCTTTGGGCTGGTGGAAGCGAAACCACAACGTGCATCACATTATT
ACCAACGACCCTGTGCACGACCCCGATATCCAGCATCTTCCCGTATTTGCTGTATCCAAC
CGATTCTTCTCGTCAGTCAAGTCCACCTACTATAACTGTGTGCTCAAGTACGACATCTTC
GCTCGATACCTCATTCCCTTGCAGCACATGACCTACTACCCCATTTTGTGCCTGGGTCGA
TTCAACCTTTACGCTCTGTCATGGGGCCATGTGCTTCTTGGAAGAGGCCCTCGACACGGT
AAGGCTGCGTGGTTCCGATGGTACGAGCTCATGGGACTCTCCTTCTTCGCGTACTGGTTC
TTCTACCTCATTGTGTACAAGAGCATTCCCACTGCCGGCCAGCGATGGATGTATGTAATT
GTGTCGCACGTTGCTACTATGCCTGTTCATGTGCAAATCACTCTGTCGCACTTTGCTATG
TCCACCCAGGACCTGGGTCTGTCGGAGTCCTTTGCCCAGCGACAACTGCGAACCACTATG
GACGTGGATTGTCCTGCCTGGCTCGACTTCTTGCATGGAGGTCTGCAGTTCCAGGCCATC
CACCACCTGTTCCCTCGAATGCCCCGACACAACTTGCGAAGGGCACAGCGGTACGTGCTT
GAGTACTGCAAAGATATTGGCGTGGAGTACCATATCTACGGCTTTGTGCACGGCAACCAG
CACGTGATTGGTAAGCTGGGCGAGATTGCCAAGCAAGCCGAAATCTTCCGTGACTGTGAG
CGACATCTTCGAGAGGAACATGTTGCTGAGATGACTGAGGCCAAGTAGACGGGGGTGATG
GATTAGCTTGAATTAACGGAGATGATCCCAAAGGAACGACCCAACTGAATATTATTTATG
ATTACCTATACTGGAGAAAAACCTGAAACAGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E21131g_CDS-001

Protein length: 536 aa.
Product: Delta 8-sphingolipid desaturase, putative

>YALI0E21131g_CDS-001 MSYKTRKEVLPRSEIEALIADGHHIVIYNGKVLKLDNWLDRHPGGDMAIFHVVGRDATDE
INAYHSDEALATMGAYQIGITGEKIWENFLPPIQGGVFRKRGSIAADEGISLSSSASSSS
QEAVTQKPAPIFTNEQILKAERLKLIEEDENRQLQHDLEIFPSLDYNTQTEIGTKYKALY
KRVEDAGLFEPNYRGYFSDFLRISTMFSLSWYLFDKSMFLSAICLGMGWHQLVFIAHDAG
HIGITHGYQMDNWIGMTIAAWIGGLSLGWWKRNHNVHHIITNDPVHDPDIQHLPVFAVSN
RFFSSVKSTYYNCVLKYDIFARYLIPLQHMTYYPILCLGRFNLYALSWGHVLLGRGPRHG
KAAWFRWYELMGLSFFAYWFFYLIVYKSIPTAGQRWMYVIVSHVATMPVHVQITLSHFAM
STQDLGLSESFAQRQLRTTMDVDCPAWLDFLHGGLQFQAIHHLFPRMPRHNLRRAQRYVL
EYCKDIGVEYHIYGFVHGNQHVIGKLGEIAKQAEIFRDCERHLREEHVAEMTEAK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG