YALI0E20713g

Overview

Description similar to uniprot|P43548 Saccharomyces cerevisiae YFL055w AGP3 amino acid permease
Locus type CDS
Locus tag YALI0E20713g

Location

Species Yarrowia lipolytica Positions 2450177..2451909
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1733 (nuc.)
Previous locus YALI0E20691g Next locus YALI0E20735g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E20713g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E20713gYALI0E20713g_mRNA-001YALI0E20713g_CDS-001

Nucleotide sequence

 

>YALI0E20713g
ATGAGTTATACTCCCTCCGAAAATTCGGTGACCAAGCCCGAACATGACGATCTCCATAAC
GACGTCAAGGGCTACACCCACGATCAAGAACATGCAACCACAGATTTCAGCGATGGACCG
GCCGCGGAAATAGCCGATGACGGAGTGAAGCGAGGTCTTAAGACCCGTCATCTCAGTATG
ATGGCCCTGGCCGGTATCATTGGCCCCGGTCTGCTCATTGGATCTGGTGGTGCTCTGACC
TCTGGAGGTCCTGCTTCCCTGATTATCGGTTTCGGCTGTATCGGAATCATTGCCTTCTCT
ATCATGCAGTCTCTTGGTGAAATGACTACCCTGTACCCTACTGGTGGAGCATTCACCAAG
CTGGGAGATCGATTTGTGGACGAGGCTGCCGGAGCTGCAGTCGGCTGGAACTACTTCATC
ATCTGGGCCTGTGTCCTTTCCAACGAGTACAATGCTCTGACTTCCATTCTGTACTTCTGG
TCGGAAAAAGTCCCAATTTGGGGCTACTTCCTGCTTTTCTGGTTCTTCTTCCTTGGCTTT
CAGCTGCTGGGTGTAGAAATCTTTGGTGAGGCCGAGTTCTGGCTGGGTCTCATCAAGATT
GTCGGCCTGGTTGCCTTCTTCATCTTTGCCATCGTTTACGCTGCGGGAGGAGTCGGACGA
CTCGATAACGGGGACGGAACAACGCGCGCTCTGGGATTCCACTACTGGCACGACCCTGGA
GCATTCCCTAACGGCTTTCGAGGTGTTGCTCAGGTCTTCGTCTTCTGCTCCACCTTCTAC
GCTGGAGTTGAGTCTGTCGCCGTGGCTGCTACCGAGACCCGAAACCCTTCCGTTGCTGTG
CCCCGAGCCATTCGACAGGTTTTCTGGCGTATTATCTTTGTTTACCTGGGCTCCGCCTTC
TTCTTCGGACTGGTCTGCTCCTCCAAGGCTACCCAGCTTGTTTCTGCTGACGCCAAGGCT
CTTCAGTCTCCTATGACCGTGGCTATTCAGACTGCAGGATGGCACGGAGGCGTTCATCTG
ATCAACGCCTTCATTCTGGTTACCTGTCTGTCTGCCGTCAACTCCTCCATCTACATTGGC
TCTCGAACCGTGCTGTTCATGGCCAAGGACAAGAAGGCCCCCAAGTTCCTCGCCTACACC
AACAAGCGAGGTGTGCCCGTTTTCGCCATCATCTTCACCAACGCCTTTGCCGCTCTGTCG
CTGATGAACATCTCCACCGGTGCTGGTAAGGCTTACGGCTACATTGTCAACCTGTCCGGT
GTCTCCACCTTCCTGGTTTGGGGCTCCATTTCCTTCATCCATCTGCGATTCCGAGCCGGA
TGGGCTGCTCAGGGCTACTCTCCTGAAGACCTGCCCTACCGAGCCATGTTCTTCCCTTAC
AATGCTTGGTTCGGTCTTGTTGCCAACGTTTTCCTGGCTCTGGTGCAGGGATGGACCACT
CTTTCGCCCTTCGATGCAGGCAACTTTGTCGACGCGTACATTCTGCTGCCTCTGTTCTTC
GTCATCTTCTTCCTCTACAAGATTATCTACAAGACCCGATGGGTTCGAGCTAACGAGATG
GACGTCATCTCTGGCCGACGAAAGGATCTGGATACCAAGGTCGATGAGGAGCAGATGATC
GACGGAGTCATGACTCCCAAGAAGAAGACCGTCTGGAAAAAGGTCTGTGAAAATTTCTAA
ATTCAGGCCCGTGGCCTCCCCCCATAGTTTTATTTATTTGCATTTTCAGACTC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E20713g_CDS-001

Protein length: 560 aa.
Product: Low-affinity amino acid permease, putative

>YALI0E20713g_CDS-001 MSYTPSENSVTKPEHDDLHNDVKGYTHDQEHATTDFSDGPAAEIADDGVKRGLKTRHLSM
MALAGIIGPGLLIGSGGALTSGGPASLIIGFGCIGIIAFSIMQSLGEMTTLYPTGGAFTK
LGDRFVDEAAGAAVGWNYFIIWACVLSNEYNALTSILYFWSEKVPIWGYFLLFWFFFLGF
QLLGVEIFGEAEFWLGLIKIVGLVAFFIFAIVYAAGGVGRLDNGDGTTRALGFHYWHDPG
AFPNGFRGVAQVFVFCSTFYAGVESVAVAATETRNPSVAVPRAIRQVFWRIIFVYLGSAF
FFGLVCSSKATQLVSADAKALQSPMTVAIQTAGWHGGVHLINAFILVTCLSAVNSSIYIG
SRTVLFMAKDKKAPKFLAYTNKRGVPVFAIIFTNAFAALSLMNISTGAGKAYGYIVNLSG
VSTFLVWGSISFIHLRFRAGWAAQGYSPEDLPYRAMFFPYNAWFGLVANVFLALVQGWTT
LSPFDAGNFVDAYILLPLFFVIFFLYKIIYKTRWVRANEMDVISGRRKDLDTKVDEEQMI
DGVMTPKKKTVWKKVCENF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG