YALI0E19965g

Overview

Description some similarities with uniprot|P32338 Saccharomyces cerevisiae YGR044c RME1 and other zinc-finger transcription factors
Locus type CDS
Locus tag YALI0E19965g

Location

Species Yarrowia lipolytica Positions 2376320..2377584
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1265 (nuc.)
Previous locus YALI0E19943g Next locus YALI0E19976r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E19965g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E19965gYALI0E19965g_mRNA-001YALI0E19965g_CDS-001

Nucleotide sequence

 

>YALI0E19965g
ATGTCTTCCTATCCGCAAAGTTCAACGTTTCTCTTCCCCAACACTCAACAGACATTGTCC
TACAGACACGAGAGGTACTACACCTCACCACCGCCACCACCGTGCATTGAGGGCAACTAC
TACTCTTCGGTACCGCTGGATATTCCCTGTACCAGAGACAGAAATTTGCTCACCGATGAC
TACCTCCTTACAACCCCTCTGGCGTCTCCTCCAGATCTCCATCTGGGCAGCCAACATGAA
GCCTCTTGGGGCTCCCACCAACAAGATATTGCTGCGGTATTGTTTGGTGCGACCAACGAC
AATGTGGCCTCGTCTAGGTACAGTGTCGCTCATGGCCTGGAACCTGCTCATGTGCTATCT
AGTTCGTGGCCTGGTCACACAGGTGCTGCAGATGGAGGATATCTTTCCCTCGATACTACG
CCCGGATCTCTGTCCACCAGCCAATCTGATCTCTCTGGTGGTCTACCTGTTGAGACTCCC
CCGAGCGACCTAGACGGTGCCACGGCCGAAGAGACAGACGTCTTTTCCCTGCACATGATG
TCGCCGTTCCTGTCGCCCTATCTTCAGCCCCGACTGCCCTCCGCTGAGACCACCTCACAC
AATCCATCACCCACCGCGCTGTTCGATCCGCTGCCGTCCACACCGCCAGACACAGAAGCT
GCCCACGTGCCTCGAAGCGAGGGCCCACAAAAATGCGGCATTCTGGCCCTGCTCATGGCC
AACCCAGCCATGTGGCGCCAGGCAACCCTCTCCAAGAAAGGCACCTACGTGTGCAGCCAC
TGCACGTCCCTGGGCAACCCCAGAAAGTTCAGCAACCTGGCTGCGCTGGCCGCCCACTTT
GACCACCACGAGGTGATGCGTCTGTGCAAGTGTGACTACACCAGCTGCGTGTGGTCCCTG
ATCGGCTTTTCGTCCATGCCCGAGAAGATGCGACACCTGAGATCCCAACACAGTAACAAG
CACTACAAGTGCGGGGCGTGTCAACGGGCGTTTCTCAGGGGCGACTCTCTCAAACGACAT
CTGCGATTAGTTCATGGCCAAGAACACACAACCGCTGCCGAAATCAACGAAATGACCGTC
ATGGGGCCGTTTGAGCCTACGGTGAGAAGGACTAGTACTGCGACCAGCAGTTCGAACCGC
TCCAGCACCAAATCCCCACCGCCCTCCACCTACGAGCCGGTGTTTGATTTTCTCTGTTTG
ACTCCTTAACCGGATCATTATCAAAATGTAATTATAACATGAAAAAGCAAAGCAGAAAAG
TAACA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E19965g_CDS-001

Protein length: 403 aa.
Product: Conserved hypothetical protein

>YALI0E19965g_CDS-001 MSSYPQSSTFLFPNTQQTLSYRHERYYTSPPPPPCIEGNYYSSVPLDIPCTRDRNLLTDD
YLLTTPLASPPDLHLGSQHEASWGSHQQDIAAVLFGATNDNVASSRYSVAHGLEPAHVLS
SSWPGHTGAADGGYLSLDTTPGSLSTSQSDLSGGLPVETPPSDLDGATAEETDVFSLHMM
SPFLSPYLQPRLPSAETTSHNPSPTALFDPLPSTPPDTEAAHVPRSEGPQKCGILALLMA
NPAMWRQATLSKKGTYVCSHCTSLGNPRKFSNLAALAAHFDHHEVMRLCKCDYTSCVWSL
IGFSSMPEKMRHLRSQHSNKHYKCGACQRAFLRGDSLKRHLRLVHGQEHTTAAEINEMTV
MGPFEPTVRRTSTATSSSNRSSTKSPPPSTYEPVFDFLCLTP*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG