YALI0E19701g

Overview

Description highly similar to uniprot|P39938 Saccharomyces cerevisiae YGL189C (ohnolog of YER131W) RPS26A 40S small subunit ribosomal protein S26e.c7
Locus type CDS
Locus tag YALI0E19701g

Location

Species Yarrowia lipolytica Positions 2351634..2352600
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 967 (nuc.)
Previous locus YALI0E19679g Next locus YALI0E19723g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E19701g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E19701gYALI0E19701g_mRNA-001YALI0E19701g_CDS-001

Nucleotide sequence

 

>YALI0E19701g
ACACAGCAAAGGTATGTTAAACGAGAGGACAGAAAGCGACGAGAGACGAGAGGACAACAT
GACTGCGACCCAGTGATTGCGACAGGCGATAGGTGGCGGATTGATGATCCGGAGGCGACA
TGGCGGATGTGGTGGTGGCATGGGTGATGTGGTGATCACATGGATCGTGTTGTGGGCACC
ACATTGGCGATGTTGTGATTTCACGAGCAATGTTGTGGGTTATACACGGTCCATGTTGCG
GGTTACATGGTCCATGTTGCGGGTTATACGGTCCCTGTTGCGGGTTACGCGGACTCAGTC
TCCGTCATTTGCCACAATGCGACATTCGAACACTACTAACTCAGATGGTCAAGAAGCGAG
CTTCCAACGGACGAAACAAGAAGGGTCGAGGACACGTTACCTCCATCCGATGCTCTAACT
GTGCCCGAATGGTCCCCAAGGTGAGTATCACAGGTCTTTGTAGCCAAGCTGCGAATGAGA
AGAGTGCAGGATGAAGAAGAAATGAAGAGCACAGTGATTGGTGAACAGTGACAAACTGAT
GACTGATGACTGATGACTGATGACTGATGACTGATGACTGATTAATAAGCACTGCATTCT
TCACTGCTTGCTGCTCACAAAACACTTGTGTGTGTTTTATCCACGTTTATCCGCTAACCC
CAGGACAAGGCCATCAAGCGATTCACCATCCGAAACATGGTCGAGGCCGCCTCCATCCGA
GATCTTTCCGAGGCCTCCGTCTACCAGGAGTACGTGCTGCCCAAGCTCTACCTCAAGATC
CAGTACTGCGTGTCTTGCGCCATCCACTCCAAGGTTGTCCGAGTCCGATCTCGAGAGGGC
CGAAAGGTTCGAACTCCTCCCCAGCGAGTCCGATTCAACAAGGACGGTAAGAAGATCAAC
CCTGCTGCCGCCGCCAAGGTTGTCGTTTAGGCGATGTATAAAAAATTGCACTGTGTATGA
AGCATCG

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0E19701g_CDS-001

Protein length: 121 aa.
Product: Ribosomal 40S subunit protein S26, putative

>YALI0E19701g_CDS-001 MVKKRASNGRNKKGRGHVTSIRCSNCARMVPKDKAIKRFTIRNMVEAASIRDLSEASVYQ
EYVLPKLYLKIQYCVSCAIHSKVVRVRSREGRKVRTPPQRVRFNKDGKKINPAAAAKVVV
*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG