YALI0E19679g

Overview

Description weakly similar to uniprot|P40530 Saccharomyces cerevisiae YIL042c related to rat branched-chain alpha- ketoacid dehydrogenase kinase
Locus type CDS
Locus tag YALI0E19679g

Location

Species Yarrowia lipolytica Positions 2348002..2349471
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1470 (nuc.)
Previous locus YALI0E19657g Next locus YALI0E19701g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E19679g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E19679gYALI0E19679g_mRNA-001YALI0E19679g_CDS-001

Nucleotide sequence

 

>YALI0E19679g
ATGCTCCAGAGAACACGTGGCGTGGCGAACCGGGCTGCCCTCATCACCAACTTCAGTCGG
CGCGCCCAGAATTCCGCATCACGTGACCACAAACTGACCCACAGGATGTTTTCTACGACC
ACCACCGCCTCCGTCTCGTCCGTCTCGTCCGCGTCGTCCGCGTCGTCCGCCTCCTCGTCC
GCTGCGCCAACTGCGGATCACATTTTGGAACGCAACAAACGGCTGCAGAGCGAAACGGAC
GCGGCGATTGCGCGACTGGCGGCGCTGCCACAGAAGACAATCACGCTCGACGAACTGGTC
AAGTTCCCCCGAGACCTGGAGACTAAAGAGCGCAACGAGATCCTGATAGCCAATGCCCAA
GATACGCTGGAGCAGATTAAAATCGGACTGGCGCATCGGCTCAATGCGCTGCGCAATCTG
CAGTACCTGGTGGTGCTCAATCCCCACATTGCCCAGATCTACCAGCTGTACTACTGCTCG
TTTCTGATCATCTCCAGCTTCAAACCTCCTCAGACAGTGGAGGAAAATCTGCACTTTGTG
GAGCGCCTCAAAGACCTGGTGCAGACCCACTCCAACACTATCCCAGTGCTGTCGCGGGGC
TTCTCCGAGTGCCAGAACCTCATGCCCCTATCGCAGATCAACACGCTGCTCAACTCGCAT
CTCAATGCCCGCATGGGCACCCGGCTGCTGGCAGAGCACCACATTGCGCTGACTAATCCG
ATCGCAGACAACTTCATTGGCGCCGTGCAGCTCGATTTTTCGCCCGGTAAAATGCTGCAC
GAATGCTCGCAATTTGCTGGTGAGATTTGCAACCTGTACTTTGGAGTGCGTCCCGAGGTG
CAGATTGACGTGGGTGAGGACGTGACGCTGCCGTTTGTGCCCGACCACGTGCAGTACATT
TTCCAGGAGCTGCTCAAGAACTCGTTCCGGGCCCATGCTGAGTCGTCCAACGGCAACGAT
CCTATTATCGCCACCATTTCCAAAACCGAGGATGGAGTCATGATCCGACTCAGAGATATC
GGTGGCGGTATCAAGCCCGAGAACGAGAACAAGATCTTTGAGTTCTCCTTCACCACGTTC
CAGGACGAGGGGCAGGGCGATGGGTTTGCCACGCTCAACAACTTTCACGGAGGCAGCAGT
ATTGCGGGCATGGGTTATGGGTTGCCGTTGAGCAGAGCCTATGCCGAGTTTTTTGGCGGC
AACTTGAAGCTTCAGAGTTATTTTGGACTCGGAACTGATGTCTACATTAGTTTGAAGGCG
CCCAAGGTGAGTCTGTGAACAAGTGCCAACGAAGTGCCGAGGAACAAGTGCCGAAGGTAG
TTGCCAGTTCTGAGCAGAGGCAGGGATGGCAGAGATGACTCTCTGGAGTACCTCCTGTTG
AATAATTTAATTGCATCATTTATAAGTTAACATGAGCGTAGCGATCTTGAAGCTCGCGAG
ACAGCTCAAGAATGCTGGTTTTTTATATTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E19679g_CDS-001

Protein length: 426 aa.
Product: Conserved hypothetical protein

>YALI0E19679g_CDS-001 MLQRTRGVANRAALITNFSRRAQNSASRDHKLTHRMFSTTTTASVSSVSSASSASSASSS
AAPTADHILERNKRLQSETDAAIARLAALPQKTITLDELVKFPRDLETKERNEILIANAQ
DTLEQIKIGLAHRLNALRNLQYLVVLNPHIAQIYQLYYCSFLIISSFKPPQTVEENLHFV
ERLKDLVQTHSNTIPVLSRGFSECQNLMPLSQINTLLNSHLNARMGTRLLAEHHIALTNP
IADNFIGAVQLDFSPGKMLHECSQFAGEICNLYFGVRPEVQIDVGEDVTLPFVPDHVQYI
FQELLKNSFRAHAESSNGNDPIIATISKTEDGVMIRLRDIGGGIKPENENKIFEFSFTTF
QDEGQGDGFATLNNFHGGSSIAGMGYGLPLSRAYAEFFGGNLKLQSYFGLGTDVYISLKA
PKVSL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG