YALI0E19536g

Overview

Description weakly similar to uniprot|P39993 Saccharomyces cerevisiae YEL022W (ohnolog of YJR031C) GEA2 GDP/GTP exchange factor for ARF
Locus type CDS
Locus tag YALI0E19536g

Location

Species Yarrowia lipolytica Positions 2329708..2334359
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 4652 (nuc.)
Previous locus YALI0E19514g Next locus YALI0E19558g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E19536g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E19536gYALI0E19536g_mRNA-001YALI0E19536g_CDS-001

Nucleotide sequence

 

>YALI0E19536g
ATGAGAGAGATGGAAAGACACATGTCATCACGAAACACAACGACTATGGATATTGTGGAT
CGAGAGAAGAGTGAGTGAGGCGAAGGGGGCGAGGGGCAGGAGGAGATTGTGGGCGCGGCG
CAGGGGCGCGGGCCTCACGTGACGCCGGATTTCCCCGTACTAACACAGATCTCTCTGTGG
ATCCGATTTTTCTGGTTTCGGCCGAATGTCTGGCCATCACCTCGGCGATGCGCAAAAACG
CGCGGTGGGCCAACTCGGGCGTGTCGAGCATCCTGCGAGGCCCCAGTGACACCAACGGGC
GGTCGGGATCGGACATTCGCTCGCGTCTGGGCCTCCGAACCCGAGGCAGTGAGTTCACGG
CTGCCGTGGACGCCCACCATCATCACCACCACCATGAGAGCACAGAGCGGGGTCCCGACG
ACCCGCTGATTGAGGCGTTTGCGCGTCTGCGCGTGGCGGTGGCACAGCTGGACTCGCTGG
AGCACTTTGACATGTACCAGCTGTTTCTGCCGTTCATCGAGGTGATCAGATCCCCGTCCA
CCACCGGGCCCATCACCGCCATGGCCATCACCGCCGTCAACAAGTTCTTCGACTACAACA
TTGTCAGCACCCGCAGCGTCAACCTGCAGCATGCTGTGTGCCAGCTCAGTATCGCCATCA
CCCACTGCCGGTTTGACGCCACCGATCAGGCCGACGACGACGCCGTGCTGCTCAAAATCC
TCAAGCTCATGGACACCCTCGTGGGCGGCGCCTCCGGCGATCTGCTCAACGACGAGTCAA
TGTGCGAGATTTTCGAAACGTGTCTCTCCATGGCGTGTCAATTGCGACGGTCCAACGTCC
TGAGACGCTCGGCAGAGAACACCATTCTCGATATCACTCAGAAGGCCTTTTCCAAGCTGC
GACGATTGGAGCCCGAACAGGAGATCCCCGTCGGAGCTCCAATTGCTCAGGAAGAGGTGG
TTGTTAACGCCCCGGGTGTTGTGGACACTATCGTGAGGGAGGAAGGTGCTCCTGGTGAGG
AGCCCAAGGAGGAGCCCAAGGGGGAGACCAAGGAGGAGACCAAGGAGGAGACCAAGGAGG
AGACCAAGGATGAGGTCAACGAGGAGCCCAGCAAGGAGCCCAACGAGACGCCCAGGGACC
AGAAAGGGGAAAAAGACGAAAAGGAGATGGCAGCAACTGAAACTACCACCTCCTCCACAT
CCACATTCGGAATTCCAGCAATCCGGGAATTCTACCGAGTCCTCACCTCTATCCTGGACC
CCGCAAACCACCACCAGTACACAGAAAGCACACGAGTCATGTCGTTGCAGCTCATCAACG
TGGTCTTCGAGGTTGCCGGAAAAGAACTCACCAAGCACCACTCGCTTCTCCAGATCACCA
CAGACACCCTGTGCAAGCATCTGTTCAAAATCATCCGAATGGACTCTCTTCCGCTGGTCC
AGGGCGCTCTGCGGGTCATCTCCACCATGCTGCATACTACACGTTCTCATCTCAAGTTGC
AGCAGGAGTTTCTCTTGGTCTACTTTATGAGTTGCTGTTGTCCCCTGGATGGACCCTCGG
ATGATCCCTCTTCCGATATCACTGCTCCGTCCATTCTGCTTGAAAAGAACTTCAACTACA
GTAACAGTCAGTTAGGTGAGATTAGTAAGCCTGGCACTCCCAGACCGGATTCCAGCTCTC
CAGGTGCTGATGATAACATAAACGGCACTCCTAGCCCCACTCAGGCACAGTTTGCCACTT
CGCGAAGCCCCGAGATCCGAGAAGCAATGGTCGAGACGCTCTCCACGCTGTGCAGAGAGC
CGTACTTTTTCGCAGAACTGTTTCTCAACTTTGACTGCGACGTCGACCGGGTTAATCTGT
GCGAAAACATGATGCAGTTTCTGTGCCGGTCTGCATACCCTGATGCAGCCCAGTGGTCGT
CTTCGTCCGTGCCCCCATTTTGTCTCGACGTTGTTCTTCAACACCTTTCCAAGCTGGTTG
GTCGACTAGATCAAAATGGAGACGATAAGAAGGAGGCTGCTTCTGAGCTCGTGGCCCGAA
AAGCCCGCAAGAAGGAAATCGTCGAGGCCATTGACGCCTTCAACGTGAATCCCAAGGTGG
GTATTCAAAAGTTCCTGTCTGGAGGTCTCATCAAGGACACTTCGCCTACTGAGATCGGCT
CGTTCCTGTTCCAGTCGTCACGAATCAACAAGGCCAAGCTCGGTGAATTCCTTTCCAAGC
CCGCAAACCTGCCCACGCTCAAGGCATACACTGCGCAGTTTGATTTCGATGGCAAACGAG
TTGATATGGCGCTGAGACAGTATCTCTCTGCGTTCCGACTCCCCGGCGAGTCGCAGCAGA
TTGAGCGAGTCATGGAGTGCTTTGCCGAGCACTACTCGTCCTTCTCCGAGAACCAGTCCG
TGGTGAAAAACTCCAACGACGGTGTGGTGCTCTGTTTCTCCATCATCATGCTCAACACAG
ACCTGCACAACCCGCAGGTCAAGAACCACATGTCGCTGGACCAGTACAAGCGCAACTTGC
GGGGTCAATGCGACGGTCAGGACTATGAGGCTGAGTTTCTCGAGTCCATTTACAACGACA
TTAAGACGCGAGAGATTGTCATGCCCGATGAGCATGACTCCAACGAGTCCTTCGAGCACT
CGTGGGGCGAGCTGCTGATGAAAACTGACCAGGCGGGGCTCATGACGACCGACCTTAACT
CGAACGCGTTTGATCGGTACGTGTTTGAGGTCACGTGGCGGCCCATTGTGGCCATGTTGA
CACGTGTCTTTTCCGCAGCTACGGACGACGCTGTCTTCAGCCGTGTTATTTCCGGTCTGG
ACCAGCTGGCGTCTCTGGCAAGTGACTTTGACATTGACGAGGTCATTCACGTGATTCTGG
ACCGTGTGGGAGGTATTATGGCGGCCCTGGGCGAACCGATTGACAGTCTACAGAACATTG
ACGTGTGGGTGGACCCCAGTCAGACGGATCCCATCACGGTCTCGGATCTTTCTGTGCAGT
TTGGACTCGATTTCAAGGCTCAGATTGCCGCGGTGGTCTACTTTACGATCGTGTCCAACC
ACAGCGAGCACCTGAGCGACGATGTGTTTGTGTTTGTGGCCAAGGTGCTCAACAACATTT
ACGAGAACGGTCTACATCCTACTCCGTTGTTTGGTGCGTTTGAAAGCACCGAAAAGAGTG
CATTTAAGAATGATTTGCCTCGAATTGCCGCTCCAAACAAATTTAAAAAGTACGAGAGCG
GCAAGGAGGGCGTGGGTCTTCTGAGTACGCTGTCTTCGTACCTCACGGGAGGCTACAACG
AAAACAACCAACCTACTGACGAGGAGATTGAGGCTACTTTGAGCGCTCTAGACTGCCTGG
CGAGCTGCAAGGTGGATGAGCTGTTTGGGCGACTTCAGACCGGTGAAGAACCGACTGTTC
AGTTCGTTAATGCCCTTACTGGAGTCCCCTCCATCTACTCGTTCCATCTGATGGCACTGC
TGGGCCAGAAGAACAGCCATGTGACTACACTAGTGATAGACCGGTTCGGCGACTCTCTGG
ACGACGGTGCTACTATTAATTATCTTGCAGGATTGCAGAAGGACAGTGGAAAGCTCTTCG
CGCAGCTTCTCAAGGTTGACTCTGAGGTTCTGCGTTCTCTGGCTCCTGAAATCGACTCTC
TGATCCTCTCCTTTGCTCTGTTTGACAACACGGACTACCTGGAAGTGGTCAAGATCCTGG
CATCCAACGTGGCATCCAGCGAACGGGTGTTTGAGTTAATTGAAAAGCACGTGGACGACA
TTCCCGTGGCCAACCTCGTGTCCATTCTTGACGAGTTTGTGTCAGTGTCGTCCGTGGGCG
CTCCTCTCGAGCAGCGAGGTCTTGTTTTGGACTCTCTGACTGCGTCCAGCTCTGAAAAGG
ACGTGGATAAGCTGCTGAGCAAGGTCAAGTCCAAGAGGGAGGACACCAAACAGACCGTGG
AGCACGTTATTCGCGGCCTTAAGGCCCTACAACTCGCGCACAAGGCAGCCTTCACACACA
ACACCTCTGCATACATTGAGTTCCTGGCTCATCAGAGCTATAATCCTTGTCGGCGAATCC
GATCCGAGACTCTCAAGACTCTGGAGAACCTGTTGCGAGACAAGGAGATCTACTCGCAGC
CCGGGTTTTCGTGGGAAGAGAGTGTGTTTGAAAACGGGCTGTTCCCGCTAGTCAAGGAGC
TGCTCAAGCCTGAGGTGTACGAACTGGATAGTGCCGGAATGGGCTCCACGCGAGTCAAGG
GTGCCATGCTGCTGTGCCGAACGTTTTTGCATTACGTTGATGCGGCTGAGGCCAATGGAG
GCGATTTCGATAGCGTGCACGCGCAGGTGATCCAGCTGTGGCTGACCATGCTTACCATGC
TGGATCGGCTCATGTCGTCGTCTTCCGACGCGCAGGAGGCGCTGGTGGAGTCGCTCAAGA
ACGTGCTGTTGGTGCTGGTGTCGTCCAAGCATCTGGATCCCCAGCAAGGCGGCTCCGACT
GGGACGATTCGTGGAACCGGCTCGACCAGTTTGTGCCGGGTTTAAGAACCGACTTGTTCC
CGGATAGCAAGGAGCCTGAGGTCAAGCGGGCTACGTAGGACGAGTTCGAGTGAGTAGTAC
AAGAGTAATAGATTAGAAATGTTAGTGGATGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E19536g_CDS-001

Protein length: 1500 aa.
Product: Conserved hypothetical protein

>YALI0E19536g_CDS-001 MREMERHMSSRNTTTMDIVDREKNLSVDPIFLVSAECLAITSAMRKNARWANSGVSSILR
GPSDTNGRSGSDIRSRLGLRTRGSEFTAAVDAHHHHHHHESTERGPDDPLIEAFARLRVA
VAQLDSLEHFDMYQLFLPFIEVIRSPSTTGPITAMAITAVNKFFDYNIVSTRSVNLQHAV
CQLSIAITHCRFDATDQADDDAVLLKILKLMDTLVGGASGDLLNDESMCEIFETCLSMAC
QLRRSNVLRRSAENTILDITQKAFSKLRRLEPEQEIPVGAPIAQEEVVVNAPGVVDTIVR
EEGAPGEEPKEEPKGETKEETKEETKEETKDEVNEEPSKEPNETPRDQKGEKDEKEMAAT
ETTTSSTSTFGIPAIREFYRVLTSILDPANHHQYTESTRVMSLQLINVVFEVAGKELTKH
HSLLQITTDTLCKHLFKIIRMDSLPLVQGALRVISTMLHTTRSHLKLQQEFLLVYFMSCC
CPLDGPSDDPSSDITAPSILLEKNFNYSNSQLGEISKPGTPRPDSSSPGADDNINGTPSP
TQAQFATSRSPEIREAMVETLSTLCREPYFFAELFLNFDCDVDRVNLCENMMQFLCRSAY
PDAAQWSSSSVPPFCLDVVLQHLSKLVGRLDQNGDDKKEAASELVARKARKKEIVEAIDA
FNVNPKVGIQKFLSGGLIKDTSPTEIGSFLFQSSRINKAKLGEFLSKPANLPTLKAYTAQ
FDFDGKRVDMALRQYLSAFRLPGESQQIERVMECFAEHYSSFSENQSVVKNSNDGVVLCF
SIIMLNTDLHNPQVKNHMSLDQYKRNLRGQCDGQDYEAEFLESIYNDIKTREIVMPDEHD
SNESFEHSWGELLMKTDQAGLMTTDLNSNAFDRYVFEVTWRPIVAMLTRVFSAATDDAVF
SRVISGLDQLASLASDFDIDEVIHVILDRVGGIMAALGEPIDSLQNIDVWVDPSQTDPIT
VSDLSVQFGLDFKAQIAAVVYFTIVSNHSEHLSDDVFVFVAKVLNNIYENGLHPTPLFGA
FESTEKSAFKNDLPRIAAPNKFKKYESGKEGVGLLSTLSSYLTGGYNENNQPTDEEIEAT
LSALDCLASCKVDELFGRLQTGEEPTVQFVNALTGVPSIYSFHLMALLGQKNSHVTTLVI
DRFGDSLDDGATINYLAGLQKDSGKLFAQLLKVDSEVLRSLAPEIDSLILSFALFDNTDY
LEVVKILASNVASSERVFELIEKHVDDIPVANLVSILDEFVSVSSVGAPLEQRGLVLDSL
TASSSEKDVDKLLSKVKSKREDTKQTVEHVIRGLKALQLAHKAAFTHNTSAYIEFLAHQS
YNPCRRIRSETLKTLENLLRDKEIYSQPGFSWEESVFENGLFPLVKELLKPEVYELDSAG
MGSTRVKGAMLLCRTFLHYVDAAEANGGDFDSVHAQVIQLWLTMLTMLDRLMSSSSDAQE
ALVESLKNVLLVLVSSKHLDPQQGGSDWDDSWNRLDQFVPGLRTDLFPDSKEPEVKRAT*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG