YALI0E19514g

Overview

Description weakly similar to uniprot|P25644 Saccharomyces cerevisiae YCR077c (PAT1) topoisomerase II-associated protein
Locus type CDS
Locus tag YALI0E19514g

Location

Species Yarrowia lipolytica Positions 2325645..2328261
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 2617 (nuc.)
Previous locus YALI0E19492g Next locus YALI0E19536g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E19514g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E19514gYALI0E19514g_mRNA-001YALI0E19514g_CDS-001

Nucleotide sequence

 

>YALI0E19514g
ATGTCTTTCTTCGGTATCGCACAGCCCAATCAGGGCAACGTGCAGGAGTACGAATTCGAC
GACACGTACGACGACAATCTTGGCGGACAGCTGGATGAGTCTGGCGACGCCTTCAACGAC
GAGACGTTTGGCGGCGAGGCGTCTGTGGGCCGGGATTTCGACTTCCACGGCGAAACGGCC
AAAATCTCGTACGCCATTGACGAGGACCAGGTTGCCTACGAACGCCGGGCGCCTCAGCAC
GCCCAGATGCAGCACCAGCAGCAGCAGCATCAGCAGCGACAAGCTCCCCCTTCTCTGCAG
CCCATGGCGTCTCTGTGGGGCGCTCCCGACCAGAAGGAGCGAATCATGGGCGACGAGGCC
CAGCACGGCGGCCAGCAGGCCCAGCAGGCTCACCTGCAGCAGCAGCAGCACTACCAGCAT
GTTGCTGCCCAGCAGGGCGGTCAGCAGCCTCTGTCTCTGGAGCAGATTGAGGCGCAGCTG
ATGGGTCGACAGGCCCAGGCCCAGGGCCAGCAGCAGCAGCAACACGGTGTGCCTCCCCAG
GGTCACGCTCCTCCTCAGGGCCACTTTCCTCCCGGGTACGGCTACCAGGGCTTCCCTCCT
GGTTACCCTCCTCCCCAGGGACACCCCATGCAGTACCAGCAGCCCTGGCAGTTCCCTCCC
CTGCCCAACCATGATCTCAACATGCAGATGATGATGCACTACCAGCAGCAGCAGCAGCAG
CAGCAGGGACAGGGACAGTTCCAGCAGCCTCAGTTCCAGGGACAATCTCAGGGTCAGCCC
CAGGTTCAGGTTCAGCAGCAGCAGCAGCAGCAGCAGCAGCCCCAGGCTCAGACTCAGGGT
CAGCCCCCCGCTGTCGCTTCTCAGCCTGCTTCTCAGCAGCAAGCTGCCCCTCCTACCGCG
CCCCTAGGCCCCAAGGAGGACAAGGCCATCCCTACCGCTCCTCAGGGCTTCCAGGGCCCT
CCCCACTCGGGTCCCTACGGCTACCAGCCCGGCCCCGTGCACGTATCGCCCAACCACACG
ATCCCTCCCATGGATGAGAACGCGCGACTGGCCAAGCGAAATGAGATGATCAGCAAGCGA
AAGCCACACAACAATCTCATGACCGGCGGTGACAAGGACTTTGTGCTGCGAGTCCAGCTC
CAGCAGATGGTCACCGAGGACCCTTACAACGAGGACTTTTACTACCAGGTGCACTCGGCC
ATCAACGTGCGATCCAACCCCAACCAGCCGCTCGACGCCTTTGCGCGAACGTACCTGTAC
CAGCGGGGTCAGCGGGGCCGACGGGCCCGCGGCAACGAGAACGGCCTGCAACGTCTGCAG
CAGCAGGTCCACAAGGCCGTGCAGTTTGTCAAGGACCACCCCAAGAAGGACTCCATTATC
TCCCAGGGTGCTCTCGGTAAGATTCACCTTGGCAGCAACAAGGGTCCTCGACAGGCTCTC
GACCTGCGAAAACGAGATGATACTCCCGACGCCGACAACTCTACTGAGGCTCCTACTGAG
GGAGTTTCTGCCACCCCCGAACTTCGATCTGCTACCCCCGTGGCCACCACCACCACCACC
ACCGATGCCATTCGATCCATCACCACGTCAATCTCCAAGTTCAACCTTCAGGGCGGCTCG
TACGTGTCTGCTAACGACAAGCGAGGTATTCTGCGGGCCATTGAGAACGTGTACATTGTG
CTGCTACGTCTGGAGGCTGCAGAGAGAACCCAGCCCGAAGACGACCTGTCCGACGAGTTC
CAGGTGTGGAAGGGAGAAAAAGACGCGCTGGTGACCCAGCTGTGGCGTGAGCTGCAGATT
ACTGCGCCCATCGACCAGGCCGACGGCTCGCTGCACCCCTTCATTGCCATGCTCTCGCAT
GCCAAGTGCAAGAAGGCCATTCCCCGAGTTTTCCGGCATATTTCTGCCGAGCAGCGGCTC
ACCATTCTGACCATGATCATGGCCCACATTGGCGATTTGGACGTGGTCAAGAATGGCCAC
TACAGCGGCGAGGAGTCGAACCTGCCCGCCAAGTCGCGGGAGGCCATTGAGGTCTTCTCT
CAGACCGTCCTTCCTCCTCTGGTGCAGTACATTTCTGAGGCCGAGTACGGCGTCATTGTG
GGTCTGCTGGAGTTGATGATGGATCGAAATGACACTGCTGCTGTTGTCAAGACCAAGGTT
GGATCTGCATTTGTGACTGTTTTGATTTCCCGGGCCGAGCTGATCAACCAGGAGGGCTCT
GTTTCTGCCGAAGATGAGGAGACCTGGAACCGCATTTTCAACCGTGTTTTCGGCATTGTT
CAGCGCAACAATCTCAACTCCCTGTTCCCTCCTCGAAATGTGGACGATTCTTACGTGTGG
CAGTTCCTGGCGTCCATCGCCTTGGCTGCGAAGATTGATCACCAACGTGTTATGGTTGAC
GATGTGCGGGACAAGATCTTTGGTACTATGAACGAGGCCAAGGCTCTTCCGCCAGATCTG
TCGCAGCAGAAGATTAACAATCTGAACCTGTTCCTTAACGTCATGGGTCTCAATGCGACC
ACTTCGGAGATTGGTGAGTTGCAGGGGTGATTAGATGAGGGAGCAGTGGTTATGTAAAAT
AGGATTTTTGAGAAAAAGATGATTTGACCGTTTGACC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E19514g_CDS-001

Protein length: 850 aa.
Product: Conserved hypothetical protein

>YALI0E19514g_CDS-001 MSFFGIAQPNQGNVQEYEFDDTYDDNLGGQLDESGDAFNDETFGGEASVGRDFDFHGETA
KISYAIDEDQVAYERRAPQHAQMQHQQQQHQQRQAPPSLQPMASLWGAPDQKERIMGDEA
QHGGQQAQQAHLQQQQHYQHVAAQQGGQQPLSLEQIEAQLMGRQAQAQGQQQQQHGVPPQ
GHAPPQGHFPPGYGYQGFPPGYPPPQGHPMQYQQPWQFPPLPNHDLNMQMMMHYQQQQQQ
QQGQGQFQQPQFQGQSQGQPQVQVQQQQQQQQQPQAQTQGQPPAVASQPASQQQAAPPTA
PLGPKEDKAIPTAPQGFQGPPHSGPYGYQPGPVHVSPNHTIPPMDENARLAKRNEMISKR
KPHNNLMTGGDKDFVLRVQLQQMVTEDPYNEDFYYQVHSAINVRSNPNQPLDAFARTYLY
QRGQRGRRARGNENGLQRLQQQVHKAVQFVKDHPKKDSIISQGALGKIHLGSNKGPRQAL
DLRKRDDTPDADNSTEAPTEGVSATPELRSATPVATTTTTTDAIRSITTSISKFNLQGGS
YVSANDKRGILRAIENVYIVLLRLEAAERTQPEDDLSDEFQVWKGEKDALVTQLWRELQI
TAPIDQADGSLHPFIAMLSHAKCKKAIPRVFRHISAEQRLTILTMIMAHIGDLDVVKNGH
YSGEESNLPAKSREAIEVFSQTVLPPLVQYISEAEYGVIVGLLELMMDRNDTAAVVKTKV
GSAFVTVLISRAELINQEGSVSAEDEETWNRIFNRVFGIVQRNNLNSLFPPRNVDDSYVW
QFLASIALAAKIDHQRVMVDDVRDKIFGTMNEAKALPPDLSQQKINNLNLFLNVMGLNAT
TSEIGELQG*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG