YALI0E19294g

Overview

Description similar to uniprot|Q06593 Saccharomyces cerevisiae YPR194c OPT2 Oligopeptide transporter
Locus type CDS
Locus tag YALI0E19294g

Location

Species Yarrowia lipolytica Positions 2294957..2297617
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 2661 (nuc.)
Previous locus YALI0E19272g Next locus YALI0E19305r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E19294g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E19294gYALI0E19294g_mRNA-001YALI0E19294g_CDS-001

Nucleotide sequence

 

>YALI0E19294g
ATGACAGACATCAAGCCTGTGGACCTCGACACCAAGGAGTATGACATTGACACGGCCGAT
GTGCGGGAAATCACCCTGCACACCGAGGAATGGATTGCGCAGAAGCTGCTGATTCCTCCC
TCGGACGTTGACGGCACCTACCCTCGAAGTGTGACCGTCATCTCCCAGGCGTTTGAGAAC
ATGAGCGAGGCCGAGGCCATTGCCATTGTCAAAAAGGCCTGGGACCAACACAGTTCCGAC
GCCAACTTAACCGCCGAACACAAGGATGTGTTGCAGCACCTGATCGAGATGATAGGAGAA
GGCAAAGAGGGCGAAGATGAATCTGTGCCTCCTGAGGATCTCGAAGAGCTCAAGTACCAG
GCCTGTCTGTTCCATCACTGGTCTCCCTACCAGCAGGTCCGATCCGTGACTACTCCCTTT
GACGACCAAGACGAAGAGTGCGAGACTTTTCGATGCTACGTTATTGGTATCATCTGGGTC
GGTATTGCTGCCTTTGTCAACCAGTTCTTCAGTCCTCGTCAGCCCCCCATCCAGCTGACT
GTGGCAGTTATCCAGTTGCTTCTGTACCCCTCGGGTCGTCTGTGGCAGTTCATTTTCCCA
GATTGGGGCTTCAAAGTCCGAGGAGTTCGATACAGTCTAAATCCCGGCCCGTGGACCCAG
AAAGAACAGCTTCTGGCCACGCTCATGGCCTCTGTCGCCAATGTGCCTCCCTATATTGAC
TACAACATCTTTGTGCAGTATCTGCCCAAGTTCTACAATCAGCCCTTTGCCCTCAACTTT
GGCTATATGGTAATGATGATGCTGACGACACAGTTTATGGGCTTTGGCATGGTTGGATTC
CTGCGAAAGCTCGCCGTATACCCTGCCAAGGCCATGTGGCCCACCCTGCTACCTACTCTG
GCCGTCAACAAGGCTCTACTTGCCCCCAACCGAAAGGAGAAGATCAACGGCTGGACTATG
ACTCGATACACCTTCTTTCTGCTGGTGTCTGCCATTGCCTTCATCCAATTCTGGGTGCCC
AACTACCTGTTCCAGGCCATTTCCACCTTCAACTGGATGACCTGGATTGCGCCAAACAAT
GTAGTTCTGGCCGCCATCACCGGAGGCGCCTCTGGTCTGGGCTTCAACCCCATTTCTTCG
TTTGACTGGAACCAGTTCACCGCGGCGGTTTTCCCGGTAATGTTCATGCCAATCTCATCG
CTCGTTCTGGGAGTCTCAGGCATGTTTGTCGCCGGCTTCATCATCCTGGCTGTCTGGTAC
ACCAACACCCAGTACGCCGGCTACCTTCCCATCAACTCTGCAGACGTGTTTGACAACACT
GGTCTTCCTTTCAACGTGTCTCGAATTCTGACCAACAACGAGTTTGACGAGGCCAAGTAC
CGGGCCTACTCGCCTCCCTACTACGCCGCAGCCAACCTGGTGGTCTATGGAGCCTTCTTT
GCTGTCTACCCCATGTCTTTCTTCTACACGGTCATAATGGAGTGGGAGATCATGAAGGTC
AGTCTGCGAGACCTGTACGACGGCTTCAAACACTGGAAACGGTCTAATTACTACGGGTTC
GACGACTACTTCAGCCGAACCATGTCCAAGTACGCCGAAGTGCCCCAATGGTGGTACATG
GTGATTCTGCTCATCACCTTTGGCATGTCCATTGCTCTGATTGAGCACTGGAACACCAAG
GCCACCGTGTGGATGCTGGTGGTGGTCATGCTCATCAACTTTGTCTGTCTATTCCCCTTT
ACCATCGTCATGTCCTACACGGGTATCCAATTCACTCTTAACGTGCTGGTGGAGCTCATT
GTGGGCTACGCTCTGCCCGGTAAGGGTATTGCCATGATGATTCTCAAGGCCTTTTCTGTA
CAGATCCAGATCCAGTGCCAAAACTTCCTGACAGACCAGAAGGTGGGCCACTACGGAAAA
CTACCTCCCAGATCAATGTTCCGAGTCCAAATGCTGGCCACTATTGTCGCTGGTCTGGTT
ACCCTCGGAGTCATGCAATTCCAGCTCAATGATGTTGAACACATGTGTGACGTGAAGTAC
CAGACTTCTCATGAAAAGTTCACCTGTCCGTCGGAAACCGTCTTCTTCTCCGCCTCCGTC
ATTTGGGCTGTGGTGGGACCCAAAAAGATCTTCGACTCCCAGTACCCCATTCTGCGATGG
TGTTTCCTCATTGGCTTTGGAATCGCCCTGCTGTTTGTCTTCCTCCAGAAGTTCGTGCCT
AGAATGCTCAAGAAGCGATACCCCGACCGAGCCTCTGAGATTACCAAGTGGGAGGCCCGA
TTCAAGGAAGTTAACCCGTCCATCATCTGCTACGGCTTCCTCAACTACGCCCCATACAAC
CTGACCTACGTGTGGTCCGGAGTCTACCTGGCCTTCTTCTTCAACGTGTACATCCGAAAG
CGGTTCCCCGGGTGGTGGGAAAAGTACACCTACGTCTTCTGCTCGGCCATGAACACCGGC
ATTGCCCTCAGTGCCATCATCATCTTCTTCGCGCTCCAATACACCAACGTCAACCTCACC
TGGTGGGGCAACACGGTTTCATTTGCCGGTGTCGACGGAGCTGGCGGAGCAGGCATCGTC
CCCATTCCAGACAAGGGCTTTTTCGGCCCAGACTCTGCTCATTATCCTTAGTAATTAGTA
ATTTAGTATTATGTGCTTGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E19294g_CDS-001

Protein length: 877 aa.
Product: Oligopeptide transporter, putative

>YALI0E19294g_CDS-001 MTDIKPVDLDTKEYDIDTADVREITLHTEEWIAQKLLIPPSDVDGTYPRSVTVISQAFEN
MSEAEAIAIVKKAWDQHSSDANLTAEHKDVLQHLIEMIGEGKEGEDESVPPEDLEELKYQ
ACLFHHWSPYQQVRSVTTPFDDQDEECETFRCYVIGIIWVGIAAFVNQFFSPRQPPIQLT
VAVIQLLLYPSGRLWQFIFPDWGFKVRGVRYSLNPGPWTQKEQLLATLMASVANVPPYID
YNIFVQYLPKFYNQPFALNFGYMVMMMLTTQFMGFGMVGFLRKLAVYPAKAMWPTLLPTL
AVNKALLAPNRKEKINGWTMTRYTFFLLVSAIAFIQFWVPNYLFQAISTFNWMTWIAPNN
VVLAAITGGASGLGFNPISSFDWNQFTAAVFPVMFMPISSLVLGVSGMFVAGFIILAVWY
TNTQYAGYLPINSADVFDNTGLPFNVSRILTNNEFDEAKYRAYSPPYYAAANLVVYGAFF
AVYPMSFFYTVIMEWEIMKVSLRDLYDGFKHWKRSNYYGFDDYFSRTMSKYAEVPQWWYM
VILLITFGMSIALIEHWNTKATVWMLVVVMLINFVCLFPFTIVMSYTGIQFTLNVLVELI
VGYALPGKGIAMMILKAFSVQIQIQCQNFLTDQKVGHYGKLPPRSMFRVQMLATIVAGLV
TLGVMQFQLNDVEHMCDVKYQTSHEKFTCPSETVFFSASVIWAVVGPKKIFDSQYPILRW
CFLIGFGIALLFVFLQKFVPRMLKKRYPDRASEITKWEARFKEVNPSIICYGFLNYAPYN
LTYVWSGVYLAFFFNVYIRKRFPGWWEKYTYVFCSAMNTGIALSAIIIFFALQYTNVNLT
WWGNTVSFAGVDGAGGAGIVPIPDKGFFGPDSAHYP*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG