YALI0E18788g - CWP1

Overview

Description uniprot|Q8TFK5 Yarrowia lipolytica YALI0E18788g CWP1 GPI-anchored cell wall protein
Locus type CDS
Gene name CWP1
Locus tag YALI0E18788g

Location

Species Yarrowia lipolytica Positions 2242962..2243706
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 745 (nuc.)
Previous locus YALI0E18766g Next locus YALI0E18810g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E18788g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E18788gYALI0E18788g_mRNA-001YALI0E18788g_CDS-001

Nucleotide sequence

 

>YALI0E18788g
ATGAAGTTCACCGCCGCCACCCTCCTTCTCGCCGCCGCCGCCTCTGCTCTTGACGTTGTC
ACCGACGGCTCCAAGCCCTTTGGCATCATGTCTCTGCGATCCGCCTCCGCCATCCACCTC
TCCTCGGTAGGCGTCTCCGGTGACGCTCTGACCATTGGCTCTTCCGGCGCCAAGTTCACC
ATCAAGGACGGCGTCCTCTACGCCGACGACAAGGCCATTGACTTCTCCTCCGGCGAGGCC
AAGGTCGCTTCCGACGGCAAGGGTACCTCCGGCGTCACCCTCGAGAAGGGCTACGTGACC
GTCCCCGGCTTTAACTGGGCCGGCTGCCCCGAGGGCAACGGTTACGCCGTCGACGACAAC
TCCAAGTGCGAGGACGACGGAATCCCCTTCGGCGCCTACGCTGTTGCTGACACCTCCGCA
GAGTCTTCTGCCGCCCCCGCCTCTTCTGCCGCCGCTGCCGAGTCCTCTGCCGCCCCCTCT
TCCGCTGCTGAGGCCAAGCCCACCGCTGGAGGTAACACCGGCGCCGTCGTCACCCAGATC
GGTGACGGCCAGATCCAGGCTCCCCCCTCTGCTCCTCCCGCTGCCCCCGAGCAGGCCAAC
GGCGCCGTCTCTGTCGGTGTTTCTGCCGCCGCTCTCGGTGTCGCTGCCGCCGCTCTCCTC
ATTTAAACAGCTCCATTGCCCCCTTTAACTGCAATGACGCCTTATAATTATACCCCCTCA
TGATTAATGTAATGTTTGCCTAACA

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0E18788g_CDS-001

Protein length: 222 aa.
Product: GPI-anchored cell wall protein
Gene: CWP1

>YALI0E18788g_CDS-001 MKFTAATLLLAAAASALDVVTDGSKPFGIMSLRSASAIHLSSVGVSGDALTIGSSGAKFT
IKDGVLYADDKAIDFSSGEAKVASDGKGTSGVTLEKGYVTVPGFNWAGCPEGNGYAVDDN
SKCEDDGIPFGAYAVADTSAESSAAPASSAAAAESSAAPSSAAEAKPTAGGNTGAVVTQI
GDGQIQAPPSAPPAAPEQANGAVSVGVSAAALGVAAAALLI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG