YALI0E18700g

Overview

Description weakly similar to uniprot|Q6C7F6 Yarrowia lipolytica YALI0E01210g
Locus type CDS
Locus tag YALI0E18700g

Location

Species Yarrowia lipolytica Positions 2226611..2228014
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1404 (nuc.)
Previous locus YALI0E18678g Next locus YALI0E18722g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E18700g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E18700gYALI0E18700g_mRNA-001YALI0E18700g_CDS-001

Nucleotide sequence

 

>YALI0E18700g
ATGGTATATATACCTGGTTGCAATCTTCATACTCACTTCGAGTACACCTTCCATTTCCAC
TCTCGCTACCTACCAGTCTTTCGCTTCGGAATGGTCTCCACCCAGTCTCTCTTCTTCTAT
ACTACCCTCTGGGCCTCAACTGTGTCTGCCCAGAACGTTGTGGTCGCCCAGATTGTGCGA
AACATTGTCAACGGTTTCGTCGGTGCAAAGACAGACTCTTCCATATCAAACAGTCAGGCC
TCTGCTGAGATTCAAGCTATCGTCGACATTGTGACCCAGAATCCCAATGTTGACAAGCTG
CTCCAACAGGCTCTTCCTGCTGCCCTGATGGGTCTCAACTCTGACAACTTTCCGTCTCTG
CTGAGTGAAGCTGGAAAGACTCTAGACGCGTTTGAGACCTCTCCGGATTACCAGTCTTTG
GTAGACGGCTTTTCCAAAGCCATGCCTCATTATGACCCTTCTCAGGCTCTGGAAAACATT
CAAGTCAACCTCGACAATGCTCTGGGAATGCTTACTCCTGTTCTGCCTTCTCTTACTCCG
CAGTATTCAAGGGAGTGGGCATCAGCTACTTCACGAGTCTCCAGTCTTGGGGTAGTGTTT
GGTTTTATTGAGGGTAGTGCATCTGAGGCATCTACATCAGCTGCTACTTCTGTTACAACT
ACAGCTGATGCATCTACTTCAGCTGCTACTTCTGTTACAACTACAGCTGATGCATCTACT
TCAGCTGCTACTTCTGTTACAACTACAGCTGATGCATCTACTTCAGCTGCTACTTCTGTT
ACAACTACAGCTGATGTTTCTACTTCTGCTAGATCTGCTACAACTACATCTGAGGCATCT
ATTTCAGCTGATAATTCTGTTGGGACCACTTCTGAGGCATCTACTTCCACTGATACTTCT
ATTGCAAACACATCTGAGACTTCCACTTCCACTGATACTTCTATCACAGAGATTTCTTCC
CCAGTTAGCTCCATAACAGATTCTTCAGCCTCTTCCCCAGTTAGCTCCATAACAGATTCT
TCAACCTCTTCCACAGTTAGCACCATCAGAACAGATGCGCCAACCTCTTTGACCCAGTCA
TATGACTCTGCTACACCCACCGAGTCGTCCACCCTTTTCTCTTCTGCTACGTTCTCCACC
AGCTCCGCCCTGTCCACCATTTCGACCACCTCATCTACTTCAAGGGTTAGCACTTCTGCT
CCTCCGTTCTCCAACACAACCACCTCCTTTAGTGGCATCCACAACACCACTACCCACACT
CAAACCCGCTCTGGCACAGCTACAAACCATACCCTGACAGCTACTCCCACTTCTACAAAT
CCATCCATCCCAATCAATGCGGGCACCCACGTGAAGGCAGGTTTCGGCGTTATAGCCCTT
GCTGTTGGTGCACTTCTTCTCTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E18700g_CDS-001

Protein length: 468 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0E18700g_CDS-001 MVYIPGCNLHTHFEYTFHFHSRYLPVFRFGMVSTQSLFFYTTLWASTVSAQNVVVAQIVR
NIVNGFVGAKTDSSISNSQASAEIQAIVDIVTQNPNVDKLLQQALPAALMGLNSDNFPSL
LSEAGKTLDAFETSPDYQSLVDGFSKAMPHYDPSQALENIQVNLDNALGMLTPVLPSLTP
QYSREWASATSRVSSLGVVFGFIEGSASEASTSAATSVTTTADASTSAATSVTTTADAST
SAATSVTTTADASTSAATSVTTTADVSTSARSATTTSEASISADNSVGTTSEASTSTDTS
IANTSETSTSTDTSITEISSPVSSITDSSASSPVSSITDSSTSSTVSTIRTDAPTSLTQS
YDSATPTESSTLFSSATFSTSSALSTISTTSSTSRVSTSAPPFSNTTTSFSGIHNTTTHT
QTRSGTATNHTLTATPTSTNPSIPINAGTHVKAGFGVIALAVGALLL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG