YALI0E18612g

Overview

Description some similarities with uniprot|P0CF17 Saccharomyces cerevisiae YML002W Putative protein of unknown function
Locus type CDS
Locus tag YALI0E18612g

Location

Species Yarrowia lipolytica Positions 2214823..2217999
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 3177 (nuc.)
Previous locus YALI0E18590g Next locus YALI0E18634g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E18612g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E18612gYALI0E18612g_mRNA-001YALI0E18612g_CDS-001

Nucleotide sequence

 

>YALI0E18612g
ATGTCTGCAATGAACCCATTACTCTCGTTTTTATTCAACCACCCCAACCCATCGCAGAAG
TTTCGAGACCAGGTGGCGCAGCTGGCGCACTCCAACTACGCCATTCTGGTGCCGCAAATA
TCGCTGGACGACCACTGCGACGCGGAACTGACGCCGGAAGCGGTATTTTCGCATGTGATT
CGCATCTCGCACACGGGAGAAAACCAGAGAGCGCGATACTTTGCGTCGGCCAACGGCCGC
ACGGTGATCTTCAAAAACGATCAGGTTATGACCTACCGTGGCTACAAAAATAACGTCACC
GTGAACATCGTCGACCAGTACGTCTACACGCCAGTGTGCTGGTACCTGCCCCGAACCTGC
TTCCAGAACTTTCTGGTCTACGAGATCTCCGGGTATCTGACGGAGAAACCGCTGCCCGAA
GCGCCCAAAGAAATAGACCAGAATCAGTACGATGGACCCAGCTTTGAGGACATTCTGCTG
ATCTACCCAAACGTAGGAAGACAGCTCTCGCGACTACTGGCAACCACGTTCGATAACTAC
ACCAGCACGGCAGCCAACACGGAGGAGCTGGATCTCGAATTTGAACGAGCCACAGACAGA
GCTATTGAGTACGTCCAGGCAATAGACCCGCTGATGGTGAGAAGGATTATCGAGGAACAA
CGACTGACAGAAACTCAATTGGAAAAGAAGATTGACGAGTACGTGGAGAGCCAGCTGTCG
CGAAAGCTGTGGAATGCATTGATCGCCTTGCGAACCAATGAGGATGGACCTCTTGACCAG
GCTGTGGAGAGCATTAAGTATCTCTCTTTGAATCAAGTTGATCTTCCGGAGAATGAAAAG
CACTGGGAAGCCAAGGTTGTGGCTGCTGCCAACGTTCTTCAGACCCTGGCCAACACTTCT
ACAAACGAGTCGTTGCCATGCAATTGTCGATTCTTAGAAAACACTCTCATGAAGTGTATT
GATACGCTAACAGATGACTCGATTCAGGTCAATGCTGACGTTCTGGTCTCCCTACTTCTA
GTGGTGGTTGCACGGGCAAACATTTCGCATCTAAACTCGACTATTTATTACATTCGGTCC
TTCTCGTCCAACGCCGTGGACTCTGGAAAGCTGGGATACATGCTTAGTACTCTCGAAGCT
GTCATGTACCACATTGGCGAGAACAGAGAGCAGCTCGAGGCGATTTCTGAGGCCAACAGA
TGGTTCTTTGAACGGGTTGAAAAGGGCGATCTCACAGAATTTGACTTTGAGCGTCCTTCT
ATGAAATCCGGTCTACAACGAGACGATGCTGATTGGAAGACGGTGTTTGCAGCCACGAAC
CCTGCTGGAGAAAGTGCGCTCATGTGCGCTGTATCTTCTAATCAACAGAGCTCTCTGACT
TGTCTTTTGGACCATTTTGGATACACCCAAGAAGATATACTTGCCGATAGATCGGTTCAA
GGAAGCACTCTCCTGGTGTCTGCATTGAGAACCGAGAATGAAGACATCATCAAGCTTGTC
CTTGACAGAGTTAGAGACTGTGCTGATCTGGCTCACTACTTGTCTGTTGGTGATGAGTAT
GGACGGTCCGTGGGACACTACTTTTTCCATTCTCTGTATCTGCAACAGCAGGTTGGAAGC
CTCATCAACTGGACGGCGCGTGATAACCAGGGTCAGACGCCTCTTTCTTCATTGTGCAGA
TCTTACGATAACCCCGATTATCATGCTTTGTTCAAGAACGCTCTCAAGACGTGCCTAGAT
GCCACTGGTATGGTTGATTTGAGAGTCCATACCGACGCCAAGGGAAACACTCTTCTGCAT
ACTGTGAGTGACGAGAAGGTTCTCAGCACGCTGTTGAACCATCCTGATGTGCTGGTGAAC
GTCAATCAACCCAACAAGCGAGGTATGACGGCACTCATGGCTCATGCCAAATATGCACGG
TTGAAGGCGATTGAGGTGCTGTGCAAAGACCCTCGTATCGACTTTGCACCCACAGACAAC
AAGGGCATGAATGTGTTTGACATTGCACGCGACCGGCGCACTGCCGATTTTTTGGACGAG
TGCTACATGTCGTTGCAGCCCAATCTGGGAGAAACCGACAAATACTGCGAGATTCTACGG
TCTGTGATTGCGGATGGCGAGCTGTGTTTTGTTATCAAAACTCGGCAGGATGGGAAATTG
TCTGCTGTGAGACGTCCTTACAGCGACTTTGTGTTTCTGCAAAAGTGGCTTGCACATGAG
CAGCCCCTTTCGTGGTTCCCTGCTCTCATGACGCCCACCAACCCTTTTGCAATTCCGCAC
CGGCCGTCTCGTGAGATTCTTCATGCTATGCACCTGCGGCTGAACCTATTCCTCAGAACG
CTTTTATTGCACCCGACCTTCAGCAACCATGAGCTTCTGTGGGAGTGGCTTCTTGTGCAG
GACATTAGCCACACGCATCTGGCGGAGCGCACGACCAAGAAGCTCGAAAACAAGAAGGAG
AAGGATCTGGAGGAGTACATTATTCTTGGGGAGCCGGAGATGGACGAAATTGAAGGGTTT
GTGAGCCATGCGCTGCAACAGGTGGATCTCATGAGAAAGGCTACCATGAACCTTCATCAG
GCCAGCGTCAAATTGTGCAATGCCCATAGGGATTACTGCAAGTCTTGGATGTTGATGAAG
GAGACTGTGGATGAGCTCAAGGAGATCCCCGGAACCTCTCCCAGAGAGAACATTATTGCC
AATCTGTCGTCGGCCATGGTTACGCTTGGGGACACCTTCCGAATCAACAACTCGTCGCCG
TTTGTCTTCTCTTGCTACATTGAGTCGCTTCAGAACATGGCTGACGCCACTACTCTGGCT
TTGGCCCATCCTTTAGCTCAAATCTCGCATTTGAGACTCCAGCAAATGCTGTTGGTGAAG
CTCCAGGCCGATGCGGTGGCTCTTTCTGAGAAGAAAACGTTCCGCGACTTTTTCCATGAC
AGAGAGAAGGAGATACGGCTGATCAAAAACCGTATCCACATCACGGAGAACGAAATCAGA
CGACTGTCGATGGAGACCAAGAACGCCCAGATCACCTTGGCCTCCGAGCTTGGCGGCTTC
TACCAGGTCCATGAGCACGAGCTGACCTTGAGCATCAAGAACATTGTTTCTCGCAACATC
AAACGACATAAGGAGCTACAGGGGGATTTGGAGGAAATCCAGCGCAGATTCATTTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E18612g_CDS-001

Protein length: 1059 aa.
Product: Conserved hypothetical protein

>YALI0E18612g_CDS-001 MSAMNPLLSFLFNHPNPSQKFRDQVAQLAHSNYAILVPQISLDDHCDAELTPEAVFSHVI
RISHTGENQRARYFASANGRTVIFKNDQVMTYRGYKNNVTVNIVDQYVYTPVCWYLPRTC
FQNFLVYEISGYLTEKPLPEAPKEIDQNQYDGPSFEDILLIYPNVGRQLSRLLATTFDNY
TSTAANTEELDLEFERATDRAIEYVQAIDPLMVRRIIEEQRLTETQLEKKIDEYVESQLS
RKLWNALIALRTNEDGPLDQAVESIKYLSLNQVDLPENEKHWEAKVVAAANVLQTLANTS
TNESLPCNCRFLENTLMKCIDTLTDDSIQVNADVLVSLLLVVVARANISHLNSTIYYIRS
FSSNAVDSGKLGYMLSTLEAVMYHIGENREQLEAISEANRWFFERVEKGDLTEFDFERPS
MKSGLQRDDADWKTVFAATNPAGESALMCAVSSNQQSSLTCLLDHFGYTQEDILADRSVQ
GSTLLVSALRTENEDIIKLVLDRVRDCADLAHYLSVGDEYGRSVGHYFFHSLYLQQQVGS
LINWTARDNQGQTPLSSLCRSYDNPDYHALFKNALKTCLDATGMVDLRVHTDAKGNTLLH
TVSDEKVLSTLLNHPDVLVNVNQPNKRGMTALMAHAKYARLKAIEVLCKDPRIDFAPTDN
KGMNVFDIARDRRTADFLDECYMSLQPNLGETDKYCEILRSVIADGELCFVIKTRQDGKL
SAVRRPYSDFVFLQKWLAHEQPLSWFPALMTPTNPFAIPHRPSREILHAMHLRLNLFLRT
LLLHPTFSNHELLWEWLLVQDISHTHLAERTTKKLENKKEKDLEEYIILGEPEMDEIEGF
VSHALQQVDLMRKATMNLHQASVKLCNAHRDYCKSWMLMKETVDELKEIPGTSPRENIIA
NLSSAMVTLGDTFRINNSSPFVFSCYIESLQNMADATTLALAHPLAQISHLRLQQMLLVK
LQADAVALSEKKTFRDFFHDREKEIRLIKNRIHITENEIRRLSMETKNAQITLASELGGF
YQVHEHELTLSIKNIVSRNIKRHKELQGDLEEIQRRFI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG