YALI0E18568g - POT1

Overview

Description uniprot|Q05493 Yarrowia lipolytica YALI0E18568g POT1 3-ketoacyl-CoA thiolase with broad chain length specificity, putative
Locus type CDS
Gene name POT1
Locus tag YALI0E18568g

Location

Species Yarrowia lipolytica Positions 2210726..2212130
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1405 (nuc.)
Previous locus YALI0E18546g Next locus YALI0E18590g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E18568g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E18568gYALI0E18568g_mRNA-001YALI0E18568g_CDS-001

Nucleotide sequence

 

>YALI0E18568g
ATGGACCGACTTAACAACCTCGCCACCCAGCTCGAGCAGAACCCCGCCAAGGGCCTCGAC
GCTATCACCTCCAAGAACCCCGATGACGTTGTCATCACCGCCGCCTACCGAACTGCCCAC
ACCAAGGGAGGCAAGGGTCTGTTCAAGGACACCTCTTCTTCCGAGCTGCTCGCCTCTCTG
CTGGAGGGCCTCGTCAAGGAGTCCAAGATCGACCCCAAGCTCATCGGTGATGTCGTCTGC
GGGAACGTTCTCGCTGCCGGTGCCGGTGCCACTGAGCACCGAGCTGCCTGCCTTGTTGCC
GGCATCCCCGAGACCGTTCCCTTCGTCGCTCTCAACCGACAGTGCTCCTCTGGTCTGATG
GCCGTCAACGACGTTGCCAACAAGATCCGAGCCGGCCAGATTGACATTGGTATCGGCTGT
GGTGTCGAGTCCATGTCCAACCAGTACGGTCCCAACTCCGTCACCCCCTTCTCCAACAAG
TTCCAGAACAACGAGGAGGCTAAGAAGTGCCTGATCCCCATGGGTATCACTTCCGAGAAC
GTTGCCGCCAAGTACAACGTGTCCCGAAAGGCCCAGGACGCCTTTGCTGCCAAGTCCTAC
GAGAAGGCCGCCGCTGCCCAGGCCGCCGGCAAGTTCGACCAGGAGATCCTCCCCATCAAG
ACCACTGTTCTCGATGATGATGACAACGAGAAGGAGGTTACCGTCAACAAGGACGACGGT
ATCCGACCTGGTGTCACCGCCGAGAAGCTCGGCAAGCTCAAGCCTGCTTTCTCCGCCGAG
GGAACCACCCACGCTGGTAACGCCTCTCAGATCTCCGACGGTGCCGGAGCCGTTCTCCTC
ATGCGACGATCTGTTGCCGAGAAGCTTGGCCAGCCCATCCTTGCCAAGTTTGTCCACTGC
AAGACCGTCGGTGTTCCCCCCGAGCTCATGGGAATTGGCCCCGCTTACGCCATTCCTGCT
GTCCTTGAGGACCTTGGTCTGACCGTCAACGACGTTGACGTTTTCGAGATCAACGAGGCT
TTCGCTTCCCAGGCTCTGTTCTCCATCCAGCATTGTGGAATCGACGAGTCCAAGGTCAAC
CCCCGAGGTGGTGCCATTGCTATTGGCCACCCTCTGGGAGCCACCGGTGCTCGACAGTTT
GCCACTCTGCTCTCCGAGCTTAAGGAGTCTGGCAAGAAGGTCGGTGTCACCTCCATGTGC
ATTGGTACCGGTATGGGTGCCGCTTCTCTGGTTGTTGCCGAGTAAATGTACATACAAGAT
TATTTATAGAAATGAATCGCGATCGAACAAAGAGTACGAGTGTACGAGTAGGGGATGATG
ATAAAAGTGGAAGAAGTTCCGCATCTTTGGATTTATCAACGTGTAGGACGATACTTCCTG
TAAAAATGCAATGTCTTTACCATAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E18568g_CDS-001

Protein length: 415 aa.
Product: 3-ketoacyl-CoA thiolase with broad chain length specificity, putative
Gene: POT1

>YALI0E18568g_CDS-001 MDRLNNLATQLEQNPAKGLDAITSKNPDDVVITAAYRTAHTKGGKGLFKDTSSSELLASL
LEGLVKESKIDPKLIGDVVCGNVLAAGAGATEHRAACLVAGIPETVPFVALNRQCSSGLM
AVNDVANKIRAGQIDIGIGCGVESMSNQYGPNSVTPFSNKFQNNEEAKKCLIPMGITSEN
VAAKYNVSRKAQDAFAAKSYEKAAAAQAAGKFDQEILPIKTTVLDDDDNEKEVTVNKDDG
IRPGVTAEKLGKLKPAFSAEGTTHAGNASQISDGAGAVLLMRRSVAEKLGQPILAKFVHC
KTVGVPPELMGIGPAYAIPAVLEDLGLTVNDVDVFEINEAFASQALFSIQHCGIDESKVN
PRGGAIAIGHPLGATGARQFATLLSELKESGKKVGVTSMCIGTGMGAASLVVAE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG