YALI0E18161g

Overview

Description some similarities with uniprot|A3LN49 Scheffersomyces stipitis C2H2 zinc finger protein
Locus type CDS
Locus tag YALI0E18161g

Location

Species Yarrowia lipolytica Positions 2148777..2149875
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1099 (nuc.)
Previous locus YALI0E18139g Next locus YALI0E18194g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E18161g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E18161gYALI0E18161g_mRNA-001YALI0E18161g_CDS-001

Nucleotide sequence

 

>YALI0E18161g
ATGGGTGACGACTTCCTTGGCTGGTGGCAGGTTAGTGATTGGAAGGCGTTACCAGAGTCA
GCCATCGAAACCACCATCAGTCACCATCAGTCACCACCAGTCACCACCAGTCACCACCAG
GCACCACCAGTCACCACCAGTCACCACCAGTCACCATCAGTCACCACCAGTAACACCACC
CTCACCACCATCACCAGAGTCCTGATCTCCACCATGAAATCAAAAACCCGGTACCATTGT
CCCCATTTCGGCTGCAAAAAGTCCTACACGCGTCGGGACTATGTTGAGCGTCATGCCGTT
AATCGTGAGTATGAGTGTGAGATTGGAATCGCTCATGAGGATCGGAGTGATTCCAGAAAG
ATCAGAGTGATTCAGCAACACGCGGAGTCACTCGGAAGCACTCTGAACCAGTTTGAACCC
GCTAACACTAGACATGACCACAAAACCATACATCTGCCTGGTGTGCGACCGATACTTCAG
TCGAGCAGACCTGTTCGAACACCACATGGACACAAAGTACCACCGAAAACGTGCGGAAAA
ATACCAACACCCAGATCATCCATGGCAGGCGCCGGAGACCATGATGGGACCGGGTCAAGG
GATCGCTCCTGGCCAAGGGCTCGCTTCTGGTCCCGGTCTCGGTCTCGGTCCCGGCCCCGG
TCCAGATGGATTCGAAACTCCCCAAACGACTTTCGACAACGAAGTCATGTCTCCAAACGA
ACCTCAGGACCACCTAACCGCCCCCAACCCGGACTCGTACTTTGTCTACCAACAGAAACA
TGAGTCATCCTATTATTACCCCTCACAGCCGCTGTTTCTGGCCCCCGTTCCCCGAGCCAT
GTCCCAGAATCATAGCCAGAGTCTTAGCCAGAGCCAGAGTCTTAGCCAGAGTCATAACCT
GTCCAGCCGTCTGTCTAGTCACCCAAGCAGCCTTTCCCCGAACCATTCTCAGACCCAGAG
TCATAGTCTGAGTCCCCACCAAAACCACAGCCACCCCGCTGTCCACTCCACCCAACCAAT
GCTCATGTCACAACATGGGCCAGCCCAACAGGTGTATCCCTGGCTGCCATCCCAGGCGAA
CCCCATCCACTATGTATAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E18161g_CDS-001

Protein length: 324 aa.
Product: Conserved hypothetical protein

>YALI0E18161g_CDS-001 MGDDFLGWWQVSDWKALPESAIETTISHHQSPPVTTSHHQAPPVTTSHHQSPSVTTSNTT
LTTITRVLISTMKSKTRYHCPHFGCKKSYTRRDYVERHAVNHMTTKPYICLVCDRYFSRA
DLFEHHMDTKYHRKRAEKYQHPDHPWQAPETMMGPGQGIAPGQGLASGPGLGLGPGPGPD
GFETPQTTFDNEVMSPNEPQDHLTAPNPDSYFVYQQKHESSYYYPSQPLFLAPVPRAMSQ
NHSQSLSQSQSLSQSHNLSSRLSSHPSSLSPNHSQTQSHSLSPHQNHSHPAVHSTQPMLM
SQHGPAQQVYPWLPSQANPIHYV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG