YALI0E17941g

Overview

Description some similarities with uniprot|G3ASW3 Spathaspora passalidarum SPAPADRAFT_62602 hypothetical protein
Locus type CDS
Locus tag YALI0E17941g

Location

Species Yarrowia lipolytica Positions 2115618..2116662
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1045 (nuc.)
Previous locus YALI0E17919g Next locus YALI0E17952t

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E17941g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E17941gYALI0E17941g_mRNA-001YALI0E17941g_CDS-001

Nucleotide sequence

 

>YALI0E17941g
ATGAAGTTCTCTATCGTTTCCATGGCCCTCCTGTCCCAGGTTCTGGCCGCCCCCATCGCT
GCCGAGGCTGGCCTCGCCAAGCGAGCCGTTGTCACCGTCAAGAACACCAACGTCATCTAC
GTCAAGAACGTGGTCTACGTCGACCAGAACGGCACCCCCTACAAGACCGAGGTGGTCCCC
TACACCACCGAGGCCCAGATCGAGCAGCCCACCGAGGCCCCCGCCGCCCCTGCCCCCGAG
GCCCCCGCCGCTGCTCCCACTTCTGAGGCTGCTCCTGCCCCCGCCCCCTCCTCTGAGGCT
CCCGCTCCCGCCCCCACCCCCGAGGCCCCCAAGTCTGCTGAGCAGCCCCTCCCCGCTCCC
TCTCCTTCTCCCGCCAACTTTGCTGCCGACGAGAAGCCCGAGGCTGCCCCCTCTCCCTCT
CCCGCCCCCGAGCCCACCACCTCTGAGGCTGCCCCTGCCCCCGCTCCCGAGCCCACCACC
TCCGAGGCCCCCGCTCCTACCACCTCTGAGGCTGCTCCCGAGCCCTCTCCTTCCGCCCCC
TCCACTGGCGGTGGATCCGGTGACCACACCGGTGAGGCTACCTTCTACGACACCGGCATG
GGCTCTTGCGGCATCACCAGCACCGACTCCGACTTCATTGTTGCCCTTAACAAGGACATG
TGGCAGGCTGGTATGATCGACGGTAACCCCAACCACAACACCCTGTGTGGCAAGAAGCTG
ACTGCCCACCGAGGCGGAAAGTCTGTCACCGTGACCGTCACCGACATGTGCCCCGGCTGT
GCTTCCGGCGATCTCGATCTCTCTCCCGCCGCCTTCAACGCCCTGGCTTCTCCCAGCGAG
GGACGAGTCGGTGTCTCTTGGTCCTGGAACTAAGAGTAAGATTTATTAACAAAACCCCAT
CTTGTAGTCCTGCGCTGGCGTCGGGCTAACTCAAGATTTATATATATGAAATACCCTTAC
TCTTATGTCGAATGGCTCATCTTGAGCGTGCTCAGCGTATCGTAGAGTACTACAGATGTT
GACTGCTTCAACAGTCGTGCTTTCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E17941g_CDS-001

Protein length: 291 aa.
Product: Conserved hypothetical protein

>YALI0E17941g_CDS-001 MKFSIVSMALLSQVLAAPIAAEAGLAKRAVVTVKNTNVIYVKNVVYVDQNGTPYKTEVVP
YTTEAQIEQPTEAPAAPAPEAPAAAPTSEAAPAPAPSSEAPAPAPTPEAPKSAEQPLPAP
SPSPANFAADEKPEAAPSPSPAPEPTTSEAAPAPAPEPTTSEAPAPTTSEAAPEPSPSAP
STGGGSGDHTGEATFYDTGMGSCGITSTDSDFIVALNKDMWQAGMIDGNPNHNTLCGKKL
TAHRGGKSVTVTVTDMCPGCASGDLDLSPAAFNALASPSEGRVGVSWSWN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG