YALI0E17611g

Overview

Description weakly similar to uniprot|O43119 Aspergillus niger Peptide-N4-(N-acetyl-beta-D-glucosaminyl) asparaginase amidase N
Locus type CDS
Locus tag YALI0E17611g

Location

Species Yarrowia lipolytica Positions 2072566..2074592
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 2027 (nuc.)
Previous locus YALI0E17603r Next locus YALI0E17633g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E17611g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E17611gYALI0E17611g_mRNA-001YALI0E17611g_CDS-001

Nucleotide sequence

 

>YALI0E17611g
ATGAAGCTCTTTCACTCTCTTTCCGCATGCTTGCTTGCCTCAGTAGCGCTGGCCGCTCCT
GTGGTGGACCTAGCTTCTCGAGACCAGCAGATCATCAACACCTTCCAGGTCACTGGTCCT
AACATCCAACTAGAGTCGGTTGACAAAATCCACCTGTGGCAGCACACCTTTGCTAACAGT
TATGGAGCCCCCAAGGTTGCCCAGTACACTCCCCCCAACCAGGACTTTGACCGTGTCCGA
CTGTCCTACAACTCCTCCGTCACCACCACCCAGTACGACAGACTCATCCAGGTGTTTGTT
GGAGATACCGAGGTGTGGCGTTCTTCCACTGCCGAGCCCGTCGGTTCCCCCCTGGTCCAG
TTTGGTTTTGAGAAGGACGTTTCCGAGTACCTGGCTCTGTTCAAGGAGCCTCAGACCATC
ACTTTTGTGCTTGGCAACGTGGTTCAAGACGGTCTGCAGGGCCAGTTTGACACCAACTTC
TTCATTGAGTTCCTCAAGAGCGGAGACGGACCCCACCCTGGTACCCAGATCGGAGGAGCT
CTTACTTGGAATTACGGAACCGGAGGCGACTACTTCCGACCTGCCGACGTGGTCCATGGC
CTGTCCAAGGGCAACGGAGACTCGTACTCTTTCCCCGACGATACTGCCAAGACTTCCATC
CAGCTGCCTCGAAACACCACTCGAGCAGTTGTGGAGATCCATGCGTCCGGAAACTCCAAC
GAAGAGTTCTGGTACACCAACATGTTCAACGAGCTGTCTGGCCAGGATGGAGACGGAAAC
GGAGGTCCCAGTCGAATTGTGGAGGTCTGGATCGGAGGGAGACTCGCTGGCGTGGCCTTC
CCTTACCCCGTTGTATACACTGGAGGCATCTCGCCTTACTTCTGGACCCCCATTGTGTCT
CCCCAAGCGTTCGACGGCCCCTCCTACCGAGTGGACGTGACGCCCTTCCTGCCCTGGTTG
TGGCAGGGAATTGAGATTGAGCTCAAGCTCACCGCTCAGTACACCGACAAGCCCCAGAAC
GCGCAACAGAACTGGTTTGTGACCGGCGCTCTGCTGGCCTGGACCGAGTTGGGTCTGCAG
GGCTCCGGCAATGTGTATGTGGCAGATAACACCCCCACCTACACTCCGGCCTGGAACAAG
CTGTCCAACTCGGACATGGTGCAGGTGTCGCACGTGAACCGGGTCGTCAAGGTCATGTCT
CAGCTGCAGTTTTCTTCTCCCCGTGGCAACCTCAACGCCCAGGTCACCTGGAACCAGAAC
GGAATCTCCAGCAACATCCAGTACTACACTTCGTCTTCTCAGGCTGTTCTGCAGAGCACC
AAGGGTTCGGATTCGCTGGAGGTTGTGCTCAATGGCAACACCCAGACTGTGTGGAACGCC
TCGTACTTTTACCCCGTTGTCCTCAACACCATTCAGCAGGGTAAGGTGGCCAACTCCGAC
ATTGTCACCGGTTACGACCGAGTCAAGACTGGAGTTGCCTACGAGCGAACCGTACTCAAC
GCTACCTCGCAGATGGGTGGCGACTCGTCTTGGGGCACAACCTACCAGTCGTACTGGCGA
TCTCTAGCTGGAGCCTACGACGTGCCTTCCAACTACGATGCCACCTACTACTCCGAGGAG
GCCCAGGCCGACCACGGCAACCTGCAGTACCGAAACCCCAGTTCGTCGGGATCTGCAACC
TCCTTTAAGGATGGCAGCGTGCTGGACACCATCAATCACTACACGGATCTCGTGTTCGCC
AGTGGCAACAACCAGGACCCCTGGGCGTTTGCTACAGCACTGTCCAACGTGATCAAGGCT
CTGGGATACTCTCCCGCCGAGATCCCGTCCTCCTCCAACGACAAGTCGTTTGCCATCCAG
TCGGGTGGAGATTCGGACTCCAACGCCGGCCCTTACCGAATCGTCTTCTCCGGCGGCAAC
GGCCTTCATCAGCACTAGACTTCAGCTTCTTAATTTATACCCTACACCGCCACTCACTCA
GCCTAGAGCTCGGACTTTATCTAATGATATCATGACTTTCGTTAACA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E17611g_CDS-001

Protein length: 646 aa.
Product: Conserved hypothetical protein

>YALI0E17611g_CDS-001 MKLFHSLSACLLASVALAAPVVDLASRDQQIINTFQVTGPNIQLESVDKIHLWQHTFANS
YGAPKVAQYTPPNQDFDRVRLSYNSSVTTTQYDRLIQVFVGDTEVWRSSTAEPVGSPLVQ
FGFEKDVSEYLALFKEPQTITFVLGNVVQDGLQGQFDTNFFIEFLKSGDGPHPGTQIGGA
LTWNYGTGGDYFRPADVVHGLSKGNGDSYSFPDDTAKTSIQLPRNTTRAVVEIHASGNSN
EEFWYTNMFNELSGQDGDGNGGPSRIVEVWIGGRLAGVAFPYPVVYTGGISPYFWTPIVS
PQAFDGPSYRVDVTPFLPWLWQGIEIELKLTAQYTDKPQNAQQNWFVTGALLAWTELGLQ
GSGNVYVADNTPTYTPAWNKLSNSDMVQVSHVNRVVKVMSQLQFSSPRGNLNAQVTWNQN
GISSNIQYYTSSSQAVLQSTKGSDSLEVVLNGNTQTVWNASYFYPVVLNTIQQGKVANSD
IVTGYDRVKTGVAYERTVLNATSQMGGDSSWGTTYQSYWRSLAGAYDVPSNYDATYYSEE
AQADHGNLQYRNPSSSGSATSFKDGSVLDTINHYTDLVFASGNNQDPWAFATALSNVIKA
LGYSPAEIPSSSNDKSFAIQSGGDSDSNAGPYRIVFSGGNGLHQH*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG