YALI0E16060g

Overview

Description similar to uniprot|P39105 Saccharomyces cerevisiae YMR008C (ohnolog of YOL011W) PLB1 phospholipase B (lysophospholipase)
Locus type CDS
Locus tag YALI0E16060g

Location

Species Yarrowia lipolytica Positions 1913947..1915967
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 2021 (nuc.)
Previous locus YALI0E16038g Next locus YALI0E16082r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E16060g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E16060gYALI0E16060g_mRNA-001YALI0E16060g_CDS-001

Nucleotide sequence

 

>YALI0E16060g
ATGAAATTCTCTCCACTTTTGCTGGCGACCGTGGGTCTGGCCCAGAGCTTCTATTCGCCC
ACCGACTCGTACGCGCCCGGGTCGGTCGACTGTCCCTCCAACTCCACCCAGATTGTGCGA
AAGGGCGAGGGCCTTTCTTCGCAGGAACGAGAGTGGGTCCAGAACCGACACGAACAGACC
CGACCGGAGCTGCTCAACTACCTGAAACGGGTGGGCTTTAAGTCGGTGGACCCGGACCAG
TTCCTGGGCCAGGACACTAATATCACCATCGGACTGTCCTTTTCTGGAGGAGGATACAGA
GCCATGTTGGCGGGAGCAGGCCAATTTGCGGCTCTGGACGCGCGAACACCCAACGCCACC
GAACCGGGCCATGTGGGAGGTCTGGTCCAGGCCGCCACCTATCTGGTGGGTCTTTCGGGC
GGAAACTGGATGGTGGGATCTGTGGTCATCAACAACTTCACCACCATTCCCGACCTGCAA
CACTCGTCCGACGTGTGGGACCTGGAACACTCCATGATCAACCCCGGCGGAATCAACATC
TTCAAGACCGGCTCTTATTGGGACGACATCAACGACGACGTCAACGACAAGCAGCACGCC
GGATACAACACCTCTTTCACCGACATCTGGGGCCGAGGTCTGTCGTACCAGTTCTTCAAC
GCTTCCAACACCGCCCGACTCACCTGGTCCGAGATCCAGAACTACGACCACTTCAAGAAC
CACTCTATGCCCTACCCCATTGTTGTGGCCGACGGCCGAGCCCCCGGAACCCGAATCATC
TCCGGAAACTCCACCATTTTCGAGCTGGCCCCGTTCGAGGTCGGCTCCTGGGACCCCAAT
GTCTACTCCTTTGCCAAGACCGAGTGGCTGGGAACCAACATGACCAACGGCCGACCCAAC
GGAACCTGTGTGCATGGCTTTGACAACGCCGGTTTCATTGTGGGAACCTCTTCTTCCCTG
TTCAACCAGTTCATTCTCCAGCTCAACTCCACCGGAGTAACCGGAGTGGTCTACGACCTG
GCCCACTCTATCCTCAAGCGTCTGGATAAGGACTCGGACGATATCGCCATCTACTCGCCC
AACCCCTTCAAGGGCATGTCCTACCTCGGCAACTCGTCCATTGCCCAAACCGAGTATCTG
GATCTGGTCGACGGAGGAGAAGATGGACAGAATGTGCCCTACTACCCTCTGCTGCAGCCC
GAGAGAGCCGTCGACGTGGTCATCTCCTACGACAACTCCGCCGACACCGACTTTAACTGG
CCCAACGGAACCTCCGCTGTCCAGACATACCGACGACAGTTTGAGAACCAGGCCAATGGC
ACCATTTTCCCCTACGTGCCCGACGTGAACACATTCATCAATGAGAACCTGACTTCTCGA
CCCGCCTTCTTTGGCTGTGACGTGCAGAACATGACCTCGCTGGACAAGAACGGTTATACC
GACGTCAACTCTTCCGCCGCCCTTCCCCCTCTCATTGTCTACATTGCTAACTACCCCTGG
ACCTTTTTCTCCAACACATCGACCATGTCCAAGCTGTCGTACAACAAGAAGGAGGTTGCC
GGCATGATCGAGAACGGCTACTCCACCTCCACCCAGTTCAACGGAACCGTGGACCCCGAC
TGGCCTGTGTGTCTTGGCTGTGCTCTGCTCAAGCGAGAGGCCACCCGACGAAACCAGTCT
CTGGGCTCTGACTGTGACAAGTGCTTCTCCAAGTACTGCTGGAACGGAAAGACTGACGAT
GATGCCGAAAAGGCTCTGAAGTTTGCTCCCGCCATCTATGCCAACGGCCCTAACGTTTCT
TCCAACGCCTCAATTGGCCAGGCTTCGTCCACCTCCAAGCCCAAGAAGAACGGCGCCGAG
GGTCTGGTTCCGGGTATGGCTGCCATTGCCATTGGTTTTGCCGCTCTTCTTATGTAAGCA
TTAATATTGACTAATTGACTATATAACGAGTTTCGAGCGTCAGAGAGCGTCAGCGGGCGT
ACTGCCACGTTCCATGTGTACAACAGGTTGTATTACAAGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E16060g_CDS-001

Protein length: 639 aa.
Product: Phospholipase B (lysophospholipase) involved in lipid metabolism, putative

>YALI0E16060g_CDS-001 MKFSPLLLATVGLAQSFYSPTDSYAPGSVDCPSNSTQIVRKGEGLSSQEREWVQNRHEQT
RPELLNYLKRVGFKSVDPDQFLGQDTNITIGLSFSGGGYRAMLAGAGQFAALDARTPNAT
EPGHVGGLVQAATYLVGLSGGNWMVGSVVINNFTTIPDLQHSSDVWDLEHSMINPGGINI
FKTGSYWDDINDDVNDKQHAGYNTSFTDIWGRGLSYQFFNASNTARLTWSEIQNYDHFKN
HSMPYPIVVADGRAPGTRIISGNSTIFELAPFEVGSWDPNVYSFAKTEWLGTNMTNGRPN
GTCVHGFDNAGFIVGTSSSLFNQFILQLNSTGVTGVVYDLAHSILKRLDKDSDDIAIYSP
NPFKGMSYLGNSSIAQTEYLDLVDGGEDGQNVPYYPLLQPERAVDVVISYDNSADTDFNW
PNGTSAVQTYRRQFENQANGTIFPYVPDVNTFINENLTSRPAFFGCDVQNMTSLDKNGYT
DVNSSAALPPLIVYIANYPWTFFSNTSTMSKLSYNKKEVAGMIENGYSTSTQFNGTVDPD
WPVCLGCALLKREATRRNQSLGSDCDKCFSKYCWNGKTDDDAEKALKFAPAIYANGPNVS
SNASIGQASSTSKPKKNGAEGLVPGMAAIAIGFAALLM*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG