YALI0E15928g

Overview

Description weakly similar to uniprot|P54791 Saccharomyces cerevisiae YPR162C (ohnolog of YLR453C) ORC4 origin recognition complex, 56 KD subunit
Locus type CDS
Locus tag YALI0E15928g

Location

Species Yarrowia lipolytica Positions 1898122..1899717
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1596 (nuc.)
Previous locus YALI0E15906g Next locus YALI0E15950r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E15928g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E15928gYALI0E15928g_mRNA-001YALI0E15928g_CDS-001

Nucleotide sequence

 

>YALI0E15928g
ATGGAATCAGAATTCCCCGAAATTGGCGGCGAAATCACCCCGACGGGCGACAAAATGGAC
GTGGAAATCGTCGAGGAAGTGGTGGAACCTGCAGCTCCCGTGCTACCTCCTCCGCAGGTG
CCCAAACCTGAAGCTGTCAGTGAGACCATGATTGATACCATCAAATCCAGAACGCTGTCA
ATTTTGACGGGCAAAAGCATCCCTGAGCCGATTTTTCTCGACGGCGAAAAGGCCCGAGTA
TACAGTCTGATGGAGAACGCCATTCGGTTTGGAGAGGGAAACTCGTGCATTATTGTCGGT
CCTCGAGGAACCGGAAAGACTCTCATTGTGGAATCTGCACTGACAGAACTGGAAGAGAAA
TACAACAGCGCGGGATCACAAAACAACTTCATCACCATCAGATTGTCTGGGTACGCCCAG
ACAGACGATAAAATGGCAGTACGAGAAATAGCACGACAGTTGGACACTGTGTTACTAAAC
CAGGGCCAATTGATTGAGAACAAGAGTATTTCGGAGACTCTCAATCAGATCCTATCTCTG
TTTGACCGTGCCGACATTGACGAGAGCGAAAAGGAAACTGTCTCTTTGGTTTTCATTCTT
GATGAATTCGATCGGTTCTGTTCAACCACTAAACAGACACTGTTGTATACTCTGTTTGAT
GTCGCGCAATCATCGCGTGCACCTATTGCTGTGATTGGACTGACCCCTCGAATTAACGCC
CGTGAGCTTCTCGAAAAGCGAGTGCGGAGTCGGTTTTCACAGCGGGTGGTTCAGGTCAAG
AGACAGCACGGTATGAATGACTTCTGGGCCATTCTCAGAAACGCAGTCATTTATCCTGAA
AATCTGTTGACCATGGTCAAGGAGGAGGGCGGGAACAAGACAGCATTGCATACTGACGTG
GATCTGGACACTGTGAGATATTGGAACTGGCATTGGGAGAGCATGTTTCAGGCCGGTCCT
CTACGAGATCATGTTGAGCGTCTCTTTCACACCACGAAATCCTGTCGGGAGTTCTTCACA
TCGGCCATTTTGGCGGTGTCGCAAGCAAACCCCTGGATCAACCCCAACGACTTTGTCACT
GATGTCTTTGAGAGAGGCGTGGCCGATACCGAGTCGTTTATTGAAGGGTTATCTGACCTG
GAGCTGTCTCTCATCATCTGTGCTGCCAAGGTGGAAGTTATGTTCGAGGTTGATCAGGTC
AATTTCAATCTGGCCTATGAAGAGTACATCAAGACCGCCAAGGAGCAGAGAGAAGCCCTT
CGAGCGGTTGATCTGGAGGGAATGGCCACGGGAACAGTTGCTGGGTTCCGAATCTGGAGC
AGAGGAGTGGCACGAGCTGCATGGGAGAAACTCGAGTCTCTCAACCTCCTGTCTCCGGTG
GAGAAAAGCGCCAAGCGAGTGGCCAAACAATTGGCCTCAGACACTTCTCTGGACGACGAA
ATCCGCATGACTCGAGTGGATGTCAGTCTCCAGGAGCTGACTAACATGCTTGGAAACTCT
CATCATCTCATTCAATGGACCAAAATCCGTAGGTAACCAGCCGACCATGTATGTACATCA
CTAATACAAGTTCGATTAGAACATAATCACTCTGGC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E15928g_CDS-001

Protein length: 512 aa.
Product: Conserved hypothetical protein

>YALI0E15928g_CDS-001 MESEFPEIGGEITPTGDKMDVEIVEEVVEPAAPVLPPPQVPKPEAVSETMIDTIKSRTLS
ILTGKSIPEPIFLDGEKARVYSLMENAIRFGEGNSCIIVGPRGTGKTLIVESALTELEEK
YNSAGSQNNFITIRLSGYAQTDDKMAVREIARQLDTVLLNQGQLIENKSISETLNQILSL
FDRADIDESEKETVSLVFILDEFDRFCSTTKQTLLYTLFDVAQSSRAPIAVIGLTPRINA
RELLEKRVRSRFSQRVVQVKRQHGMNDFWAILRNAVIYPENLLTMVKEEGGNKTALHTDV
DLDTVRYWNWHWESMFQAGPLRDHVERLFHTTKSCREFFTSAILAVSQANPWINPNDFVT
DVFERGVADTESFIEGLSDLELSLIICAAKVEVMFEVDQVNFNLAYEEYIKTAKEQREAL
RAVDLEGMATGTVAGFRIWSRGVARAAWEKLESLNLLSPVEKSAKRVAKQLASDTSLDDE
IRMTRVDVSLQELTNMLGNSHHLIQWTKIRR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG