YALI0E15576g

Overview

Description similar to uniprot|Q05549 Saccharomyces cerevisiae YDR291w
Locus type CDS
Locus tag YALI0E15576g

Location

Species Yarrowia lipolytica Positions 1862552..1865690
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 3139 (nuc.)
Previous locus YALI0E15554g Next locus YALI0E15598g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E15576g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E15576gYALI0E15576g_mRNA-001YALI0E15576g_CDS-001

Nucleotide sequence

 

>YALI0E15576g
ATGGATCAGCTCTTCAATGTGTTCAAGTCGGTTAATACACTTGCAACCTTTATGAGGTGT
CGAAAACACGTTCTTCCGACAGTCAAGAACCTCAAATGTGCTCACAAAGACATTACCGAC
GCGCACTTCGCCATGTTCAAATACCTTCTTCCTGACGACATCTCCTATGTGTGGGTCGAT
TCACAGCAATACAGCGGCGATCAGAGGGATGTCTTTGACATTGAGGAAGATGGCGACAAC
TGGATTCTCATGTTCGACTTCATCGATGGTGATCTGAAACCCCAGCCAGCCAGCAAGAAA
CGCAAAGTCGAAGAGAAGGAGTGGATTGCAGTGGAAGATCGAGTCAAGGTGGAGTTGGAT
GAGACGGTTTTGAATCTTACCAATCCACGAGAGAACAATAAACGTGACAAGCAAACCTGG
AATTTCAGTGTAGAAGACATGGGCAAGCTGGCCGCCAAGCGGAATGCCAAGTTCAAGGAC
GCGGTGGAATTTTTGAGATCAAAAATGAAATCCTTAGATTACCAAGGGACCGAGGTGGAG
TACTTGAGGGAAAAGATTGAGATTCCACAAATACCGACATTTGTGGATGTTATGAATGTG
GATCGGAAGAAAGCCACAAACCAAGGACAGGCAATGGTGGATGTCACTCAACTCATCACT
GATATCACAACGAAGGAGTCCTACTCTGGGCAGATTGTCGATAATGGATATATGATCATT
CCAGAAGAGGAAGCCAGATATGGCGAGCTGGAGTATGAGCCGAACAAGGAAGTCATGGCA
GCATTTGAGTTGACCAAGGGGGTCACCAAGTTGTTCACCCACCAAGCTGATGCACTGAAT
GCCCTATATCGTGGACAAAATGTGGTTGTGTGTACACCCACTTCTTCGGGAAAGTCACTA
ATTTACCAGACGCCTGTTCTAGAGTCGCTTCTAAACAATGATTCATCCAGGGCCTTGTTT
ATCTTTCCAACTAAGGCGCTGGCACAGGACCAGAAGAGATCGCTGACAGAGCTTTCCCTG
GCCCTTGGGCTTGACTATGGAACAGTCGAAACCTTTGATGGAGATACCCCCTTTGAGAAA
CGATGCGAAATTAGAGACCGGGCTCGTGTCGTCTTCACAAATCCAGATATGATGCATGTC
AGCATTCTGCCAAAACTAGATGCAGATAGATCTTCCTGGAGGCAGTTCATCCAAAACCTG
AGATATGTCGTGGTGGATGAAATCCACTATTACAACTCCCTATTTGGCACACACGTGAGT
CTTATTCTGAGACGGCTAAGGCGCGTGTGCAAGTTACTGGGGAATAACGTGGTACAGTTC
ATTTCCTGCAGCGCTACCATCAACAGCCCTCTCACTCACATGAGTAATTTGTTTGGCCTA
GACGAGGGATCCATCACTTTGGTCGATTCACCTGGCGGAGCGCACGGTCTCAAACATTTC
TTAGCCTGGAACACCCCTTACATATCGCCCACAGATCCCCGAAGCGGCCGCGTATCTGTG
GTCGGTGAAGCCATCTCTCTTCTGGCACACATGGTGAAAGAGAACGTACGTACCATTGTT
TTCTGCAGAGTCAGGGTTATTTGCGAGCAAATTATCAAAGGTGTTCGTCAAAAGTTTGTG
GATGAAGGCAGACCCGATCTGTCTAACTTGGTTATGAGTTACCGCGGCGGCTATTCTCCA
CAAGACCGCCGCAAAATCGAGCAGGACATGTTTGCTGGTTGTTTAGTGGGTATAGTTGCT
ACTAACGCCCTGGAGCTGGGAATTGATATTGGACAGCTGGACGTATGTATCGTTGCCGGA
TTTCCCATGACTGTGTCTAATCTACGACAACAGAGTGGCCGTGCTGGACGACGAAAGGAC
GGATCAGACAGTTTGACTATTGTCATTGGTTCTGGAGATCCCGTGGACCAATTCTACATG
AAAAACCCTGACAAAATGCTTACCGAGCCTACAGAAGCCCTTACAATCGAGCCTCTTACT
AACCTATTACTCCTCGAAAGTCATATTCAATGTGCAGCTTCGGAGTTCCCCATTGAGCTG
ACACATGATGTGGAATTTTTCGGTCCTTTATTGCATACAGTGAAGGACAAACTAATTGAA
GACAAGACTGACGAGACAACCTTCTATCACACATCATCACGGTTCTCTGACAATCCTGCT
AAGGATGTTTCCATTAGAGGCATTGAGGAGAACCACTATGCTGTAGTGGATATCACCCAC
AACAAGGGTCACATCATTGAGCTTCTGGAAGAGAGCAGAGTGCCATTTTCGTTATACGAG
GGAGGAATCTTTATGCACCAAGGGTTTCCCTACCTTGTTGTTGATGTCTCAGTGGAAGAA
CGAATGGGTAAGGTCCGAAGGGTCAATGTGGACTGGTATACGAGACAGCGAGACTTCACA
GATGTGGATCCAGTCCAGTCAGAGGAGGTGAAACAGCTTTCGTATGGAAATGGGGGCGGA
AAGGTGTCATTTGGAAACATCCGCATCACAACGACTGTCTTTGGCTTCTTCAAGCTTGAC
AAGCGAGATCGAATCCTGGAGGCTGTGGAGGTTGACCATCCGTCGTTTGTGATAAACACA
AAGGGGTTCTGGATTGATATTCCACAATCCACTATGAAACTGATCGAGGCCAAGAAGCTC
TCTCTGGCCGGTGCAATTCACGCCGCCGAACATGCTCTCATCAACTTCTTTCCAAGATAT
GTTGTCTGTGGACCAGGAGATGTACGCACAGAGTGTAAAGCTCCTGAAAAGGAGTTTGCT
AAACGGCAATCCACTCGAAGACGGCCTTCACGGTTGATATTTGGAGACAAGGTAGGCGGC
GAGGGCGGCTCTGGCTTGTCACAGAAGGCTTTTCAGTTTGTGGAAGAGATCGTCAACAAC
GCTGTCGATGGAGTTAACGACTGTGAATGCGACTGGGGTTGTCACTCATGTGTTGCTGGG
GCCTTTTGCACGGAGAATGGCCTTGTGTTAAGTAAACCAGGGGCACAGATCATTCTATCC
AAGCTCGTCGGTAGGGATATTGACTGGACTAAGGTGAAGGAGGGTCCTGAGCCGAACATG
CCTATAGCAGAGACTATCACAATCGAATAGACATTCGACAAGTCAACACAATAAAATATA
AAATCTATTGTAAATATTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E15576g_CDS-001

Protein length: 1030 aa.
Product: 3'-5' DNA helicase that has DNA strand annealing activity, putative

>YALI0E15576g_CDS-001 MDQLFNVFKSVNTLATFMRCRKHVLPTVKNLKCAHKDITDAHFAMFKYLLPDDISYVWVD
SQQYSGDQRDVFDIEEDGDNWILMFDFIDGDLKPQPASKKRKVEEKEWIAVEDRVKVELD
ETVLNLTNPRENNKRDKQTWNFSVEDMGKLAAKRNAKFKDAVEFLRSKMKSLDYQGTEVE
YLREKIEIPQIPTFVDVMNVDRKKATNQGQAMVDVTQLITDITTKESYSGQIVDNGYMII
PEEEARYGELEYEPNKEVMAAFELTKGVTKLFTHQADALNALYRGQNVVVCTPTSSGKSL
IYQTPVLESLLNNDSSRALFIFPTKALAQDQKRSLTELSLALGLDYGTVETFDGDTPFEK
RCEIRDRARVVFTNPDMMHVSILPKLDADRSSWRQFIQNLRYVVVDEIHYYNSLFGTHVS
LILRRLRRVCKLLGNNVVQFISCSATINSPLTHMSNLFGLDEGSITLVDSPGGAHGLKHF
LAWNTPYISPTDPRSGRVSVVGEAISLLAHMVKENVRTIVFCRVRVICEQIIKGVRQKFV
DEGRPDLSNLVMSYRGGYSPQDRRKIEQDMFAGCLVGIVATNALELGIDIGQLDVCIVAG
FPMTVSNLRQQSGRAGRRKDGSDSLTIVIGSGDPVDQFYMKNPDKMLTEPTEALTIEPLT
NLLLLESHIQCAASEFPIELTHDVEFFGPLLHTVKDKLIEDKTDETTFYHTSSRFSDNPA
KDVSIRGIEENHYAVVDITHNKGHIIELLEESRVPFSLYEGGIFMHQGFPYLVVDVSVEE
RMGKVRRVNVDWYTRQRDFTDVDPVQSEEVKQLSYGNGGGKVSFGNIRITTTVFGFFKLD
KRDRILEAVEVDHPSFVINTKGFWIDIPQSTMKLIEAKKLSLAGAIHAAEHALINFFPRY
VVCGPGDVRTECKAPEKEFAKRQSTRRRPSRLIFGDKVGGEGGSGLSQKAFQFVEEIVNN
AVDGVNDCECDWGCHSCVAGAFCTENGLVLSKPGAQIILSKLVGRDIDWTKVKEGPEPNM
PIAETITIE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG