YALI0E14971g

Overview

Description some similarities with uniprot|P32338 Saccharomyces cerevisiae YGR044c Zinc finger protein RME1 and other transcription factors
Locus type CDS
Locus tag YALI0E14971g

Location

Species Yarrowia lipolytica Positions 1786657..1788420
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1764 (nuc.)
Previous locus YALI0E14949g Next locus YALI0E15004g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E14971g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E14971gYALI0E14971g_mRNA-001YALI0E14971g_CDS-001

Nucleotide sequence

 

>YALI0E14971g
ATGAGCGAACCCTCCCCCAACTCCCCATTCATGTGCAATACCAGCGGCTCCATCTACACT
GGTATGGCCCTACGAAAAGTCCCGACTAATTCTTACCACAACACCACTACGGACCAAGCC
CAGTCCACAACATTCTCAGTACCACCTGGAGAGCTCAAGGGTCCCATGTGGGGCCTCTCG
TGCTACGATGATGTCCAAGGCCTCTACACATACAAGGAGATTGACCCGTTGAACATTCCG
CTTCCTCCTTCAGCGTCAGTCAATATTCACCACACCCAATACTCTTGCGGACCTTACGCT
GGCTCCTGTTTCACCCAGGGGTATAACCACGACGTCTACTCTGAACAGACCTATTCAATG
TCTTCGGATTTGTCTCAAGGGCTGCTTCTATCCAGCTCTCAGGAGTCGCATGACGGCACC
ATTTACAGTTACGAGACTCCCTCTAGGACCAACCACGCGCACCACTCGCACAGCTCTTCA
TTTTCTGACATGGGTCAGCCAGCCTCTTATCACGAGGAGTTGCACGCCTCCTCTTACGAC
TCGCAACAGTCGTGTTTCTCCGACGAGTCGCGGTTGTCTTCCTTCTCCGAAACCCCACGG
ACTCCATTTTCAATTCAGGAGTTGCCATGCGCCATGGAGAAGTTCTCAACCTACTTCCAT
GAATCCCCCAAACCCGCGGATATGGATATCCTCTCACCTGAAGGATCGGACTCTGACCAG
GGTTCCAGTGAAGCTTGTGGAACCGCCGTCCAACAACTTGAGAGAGTCTCCTCCCTTCTG
TCTTCAACTCCTACGGGACACTTCTCGAACGTTGACCCACGGGTGAGAGCAACATCATTG
TTCAACACCCACGTTCCAAAGAGGGTCTCAATTGAGAATTGCGAAGAAATAAAGGCCCTA
AAGATCAAACGCCCCCTCAAGAAGCCCAAGGTTCTGAAGGAGTTTCCCTCTGTGGCAGAC
TTTGTGTATGACCCCAATCATGAGTATGATCCCTTCGTGCAGCCCACCTCGGCTGCTATG
GCGATGCTCATGAGTTGCTTGAAGCCAACCAAGAAGGATCAGGTTATGATTCTGAAGGAA
AATAAGCGCCAATTCTGGCAGCCAAACTCCAAATACCGATGCCACTCATACGTGGACCGG
ATTCTGGCTAGTGAGACACTCATTGCCATGCTCTTCAAGTCTAAGAAGGGCCCAATTGCC
TGCAACCACTGCTCCCTCAAGTTTGAGAATTACTTGGCGATTGCTGCCCATTTCGATCAG
TACAACGTCACACGTCCTGGACGGTGTAAGTATGACGATTGCCTCTCCTCTGTCCTTGGG
TTTGCTTCGCCTTCTGAGCAGAGCCGGCACACAAAGACTCAGCATGGAAACACTGCTTAC
ACATGCAGTGCTGAGGGTTGCGCTTACCACAGTCCTCGACTTGACTGTGTGAAGCGTCAC
TATTGCAAAAACCATGGGGAAGAGGCTGACTCCAAGGTCCTCTCAAAAGGAGTGCGGGCT
CTCAAGGATCTGCCCAACAAGTTCCAGGATGTTAAGAAGTCAAAAACACTGACTGACGAA
GAGGTTCGTCAGCAGGTGGCTCCTATCCTGGCGAAGTTGCGTGAGCTCCTGTAGTTGGGA
AGACTACTATTTTCAGTAGATGGCTATGGGGTGCTGTCTCAATAGACGCCAAGGAAGATA
GGATATGGGGATGGAAAAGATGATGGAGGTACAGTAGAGGGTTTTTATTTATATAAGTTA
TAATCAATCAGTGTTTTATTTCCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E14971g_CDS-001

Protein length: 538 aa.
Product: Conserved hypothetical protein

>YALI0E14971g_CDS-001 MSEPSPNSPFMCNTSGSIYTGMALRKVPTNSYHNTTTDQAQSTTFSVPPGELKGPMWGLS
CYDDVQGLYTYKEIDPLNIPLPPSASVNIHHTQYSCGPYAGSCFTQGYNHDVYSEQTYSM
SSDLSQGLLLSSSQESHDGTIYSYETPSRTNHAHHSHSSSFSDMGQPASYHEELHASSYD
SQQSCFSDESRLSSFSETPRTPFSIQELPCAMEKFSTYFHESPKPADMDILSPEGSDSDQ
GSSEACGTAVQQLERVSSLLSSTPTGHFSNVDPRVRATSLFNTHVPKRVSIENCEEIKAL
KIKRPLKKPKVLKEFPSVADFVYDPNHEYDPFVQPTSAAMAMLMSCLKPTKKDQVMILKE
NKRQFWQPNSKYRCHSYVDRILASETLIAMLFKSKKGPIACNHCSLKFENYLAIAAHFDQ
YNVTRPGRCKYDDCLSSVLGFASPSEQSRHTKTQHGNTAYTCSAEGCAYHSPRLDCVKRH
YCKNHGEEADSKVLSKGVRALKDLPNKFQDVKKSKTLTDEEVRQQVAPILAKLRELL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG