YALI0E14795g

Overview

Description similar to uniprot|P39966 Saccharomyces cerevisiae PTC2 YER089C (ohnolog of YBL056W) Type 2C protein phosphatase
Locus type CDS
Locus tag YALI0E14795g

Location

Species Yarrowia lipolytica Positions 1765657..1767333
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1677 (nuc.)
Previous locus YALI0E14773g Next locus YALI0E14817g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E14795g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E14795gYALI0E14795g_mRNA-001YALI0E14795g_CDS-001

Nucleotide sequence

 

>YALI0E14795g
AGAAAAAAAAAGAACCTTCGACAGAGAAAAAGACATCCTTGCCTTTTTGCCCCCCTCAGC
TTCTTTTCGACACCCCTATTTTTTGCGCCACTTTCTGGTTTTGATTTTTTGATACTCACA
TTGATTTATCTCTCTGGTATCAACAAACACACATTTTCATCCCCCATCAAAACACGGTAA
TACAACTTCCAGAATCACATAATGGGACAGATTTTGTCTACGCCTGTGACGGATAAAGTG
AGTATCAGCTGTTTGGACCCCGCCCGACCATGTCCAATTGCACTACTTGAGTGTGTTGAT
GCCCGTTTTCCTGGGTAGCAACGTTGAGCACCCAACGCGATGACTGACACGGGAACAAGC
GACGGCGAACATTGAATGAGGCGACATCTCCCCTAAACAACAACTAACGCAGTACTCTGA
AAAAGGAGGAGACTCCGATCTCGTCTACGGCCTGTCCTCTATGCAGGGCTGGCGAGTAAC
CATGGAGGACGCCCACGCCACCGTGCTGGAGCTCAAGGACGCCAAGGGACAGCCCGAGAA
GAAAAAGGTGGCCTTCTTCGGTGTCTACGACGGACACGGAGGTGATAAGGTTGCCATCTA
CACCGGCGACAACCTGCACCACATTGTCGCACGGCAGGAGGCCTTTGCCAAGGGAGATTA
CGGTCAGGCACTCAAGGACGGTTTCCTCAGCACAGACCGAGCCATTCTCGAGGACGCCGC
CCTCAAGCACGACTCATCTGGATGCACCGCCACCACCGCCATTGTTTCCGACGGCAAGGT
CATCTGTGCCAACGCCGGAGACTCCCGAACCGTGCTCGGTGTCAAGGGTATTGCCAAGCC
CATGTCCTTTGACCACAAGCCCCAACACGAGGGTGAGCGAACGCGAATCTGTGCCGCAGG
AGGATTTGTGGAGGCTGGACGAGTCAACGGAAACCTTGCTCTGTCGCGAGCCATTGGTGA
CTTTGATTTCAAGCGGTCACCGTACTTTCCTCCCGAGGAGCAGATTGTCACTGCCTATCC
CGACGTGATTGAGCATCAGCTGACTGCCGACGACGAGTTCCTGATTCTCGCCTGTGACGG
TATCTGGGACTGCTTCCTGTCGCAGGAGGTTGTGGAGTTTGTGCGACGAGGTATTGCCGA
GAAGCAGACCCTTGTGGACATTTGCGAAAACCTGATTGACAACTGTCTGGCCCCCACCTC
TGACCTTAGTGGTGTTGGTTGTGACAACATGACCGTCATGGTTGTGGCCCTGTTGCAGGG
TAAGACCGAGGAGGAGTGGTACAACATGGTTGCCGAGCGAGTGAAGAACGGCGAGGGTCC
TGCCGCTAGCCGAGAGGCAGTGGAGCGAGTTGCCGGAGAGGAGCGAGAGGTGACTGCCCA
GCAGTTGCAGCAGAATGCCCAGGCCCAGCAGGCTAACTCGGCATCGCTGGCTCTTCAGCA
GTTGCTTTCTTCCGGTGCCACCATCACAGACGAGAACGGCATGGTTGTGCTCAAGGCTGA
GAATGCTGCCGAGCTGCTTGCCAAAGTGGGATTTGCTCCCGAGGACGTTGGACAACTTGT
GGAGAGTGGAGATCTGGTCGAGGAGGATGTCGAGGTCGGCGGTGACAGAATCACCGAGGA
GCAGTGATTATTTAATGATGTACATGATACAATTGTTTAGTGATGTTTTCTATATTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E14795g_CDS-001

Protein length: 417 aa.
Product: Type 2C protein phosphatase (PP2C), putative

>YALI0E14795g_CDS-001 MGQILSTPVTDKYSEKGGDSDLVYGLSSMQGWRVTMEDAHATVLELKDAKGQPEKKKVAF
FGVYDGHGGDKVAIYTGDNLHHIVARQEAFAKGDYGQALKDGFLSTDRAILEDAALKHDS
SGCTATTAIVSDGKVICANAGDSRTVLGVKGIAKPMSFDHKPQHEGERTRICAAGGFVEA
GRVNGNLALSRAIGDFDFKRSPYFPPEEQIVTAYPDVIEHQLTADDEFLILACDGIWDCF
LSQEVVEFVRRGIAEKQTLVDICENLIDNCLAPTSDLSGVGCDNMTVMVVALLQGKTEEE
WYNMVAERVKNGEGPAASREAVERVAGEEREVTAQQLQQNAQAQQANSASLALQQLLSSG
ATITDENGMVVLKAENAAELLAKVGFAPEDVGQLVESGDLVEEDVEVGGDRITEEQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG