YALI0E14729g - ABC1

Overview

Description uniprot|Q6C5V9 Yarrowia lipolytica YALI0E14729g ABC1 Plasma membrane ATP-binding cassette (ABC) transporter
Locus type CDS
Gene name ABC1
Locus tag YALI0E14729g

Location

Species Yarrowia lipolytica Positions 1752768..1758138
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 5371 (nuc.)
Previous locus YALI0E14707g Next locus YALI0E14751g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E14729g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E14729gYALI0E14729g_mRNA-001YALI0E14729g_CDS-001

Nucleotide sequence

 

>YALI0E14729g
ATGGCGCACTACTACCCGTCGGGCGTGTCGTCGGTCGGCAACTTCGACTCGCTAGATGTC
GAGATCAGATCGCTGGCCGAGGGAATGGTACACAAACCTCACCATCGAGAATCGCGATAC
ATTTTCGACCACACCTTTGACGACGAGTTTCGAGAAGAGCATGAGGACGAATACGACTAT
GATATGCTGCGGAAGACGTCTTTTGAGAACCCCGACGTCAACCCTTACGTGGAGGCCAGT
GCGGAGCCGGAGCTGGATCCCTGGTCGGGCGAGTTCAACTCGCGAAAGTGGATCAAGACC
GTGCTGGGTCTCAAGGAGCGATTTGGAAACAGTAAGGGAATCACGGCCGGCGTGTCGTTC
AAGAACCTGGGTGCCTACGGGTACGGCAGTCGCAGTGACTACCAGAAGACGTTTCTCAAC
GTCATTGTGGCCACTGGAGATTTGCTGCGAAGTGCTATTGGCGCTAAACGGACAAGCAAA
ATCCAGATTCTGCGCAAGTGCGATGGACTGGTGCTTCCAGGTGAAACCTGTGTAGTTCTG
GGACGTCCCGGATCAGGATGCACTACATTTCTCAAGAGTATTGCTTGCGAGACGTACGGA
TTTCATGTGGAGGAAGAGACACAATGGAACTATCAGGGTGAGTATTTGGGATTATGGGGC
TATGAGGTTATGAGGGAGATGGAAATACCGGAATGAACATCTTCCAGGTGGTCTATTCTT
TCTTGTTGGCCGTTATTTTGTGTCCACCTGATTTTTTTTATTTTTTTATTTTTTATTTTT
TATTTTTGTGTGTTGCACACATTCCAATCAGTGCAGATCACTCCCAACACGGCCGGTATC
TAATACCTAGACCCGAATAGAGTGTTCTGTACGCGATAATCATACCAGGTGGGAATCAGA
ACACAAGAACAAAGAAAGCAGATTTCCGCGGAGCGCGAAAAACAATAACCAATAATGACC
CTACTAACGCAGGCGTACCACGAGATGTCATGACAAAGCATTGCCGAGGAGAAATTGTCT
ACAATGCTGAACACGATATCCATTTCCCTCACTTGACGGTCGGACAGACCCTCATGTTTG
CGGCTCTAGCCCGAACTCCCCGAAACCGAGTGCTGGGAGTGACCCGAGAGCAGTATGCTC
GTCACACCCGAGATGTTACCATGGCCACTCTCGGTCTGTCTCACACAATCAACACCAAGG
TTGGATCCGATCTAGTGCGTGGAGTCTCCGGTGGAGAGAGAAAACGAGTCTCTATTGCCG
AGTCCGTCGTCTGCGGAGCGCCTCTACAGTGCTGGGATAACTCCACTCGAGGTCTGGATG
CTGCGAACGCCACCGAATTCATTCGATCTCTGCGACTTTCCGCCCAGATGACAGGCGCCT
CCATGTTTGTGTCTCTGTACCAGGCTTCCCAGGAGGCCTACGACATGTTCGACAAGGTGT
GTCTGCTGTACGAGGGACGACAAATCTTCTTCGGTAAGGCCGGAGAGGCCACATCATACT
TTGAGGGTCTGGGATTCGAGCGAGCCCATCGCCAGACCACTGGTGATTTTCTGACCTCCC
TTACAAACCCTGTCGAGCGAAGAATCAAGGCTGGATGGGAGAAGCTCGTGCCTCGAACTC
CCGAGGAGTTTGAGTCTCGATGGAGATCGTCCCGAACACACGCTCTGTTAGTTTACAACA
TCGACCGATTCAATACCACTCATCCTCTTGGTGGTCAGGGTTATGTCGAGTTCATGAAGC
TCCGAAAGGAGTCTCAGGCCCGAAATACCCGTCTGTCGTCGCCATATCTGCTCTCCTGGC
CCATGCAGGTTCGTCTGTGTCTCTGGAGAGGCTTCTTGTTGGTGAGAGGAGACTTGTCCA
TGACGCTGATGACCATCATTGGTAACTTCATCATGGCCCTCATTCTGGCATCAATGTACT
ATAATTTGCGAGAGTCGACTGATGCCTTCTTCTCGCGATCTGCCCTGCTTTTCTTGGCCA
TGTTGCTGAACGCTATGGCCTCCGTTTTGGAGATTTTCGTGCTGTACGGACAGCGACCAC
TGATTGAGAAACACAAACGATATGCATTGTACCATCCCTTTGCAGAATCAATCGCGTCAA
TGTTGGTTGATTTACCGACCAAACTGGCAACTCTGATTTCAGTCAACCTCGCTCTTTACT
TCATGACTAACCTGAGACGAACCCCGGGTGCCTTCTTCATCTTCCTGCTCTTTTCGTTCA
CCTGTACCATGGCAATGTCCATGATTTTCCGGTTCACTGCTTCTGTCACCAAGACTATGG
AACAGGCTCTGGCCCCCGCCTCTGTGCTAGTTTTGGCACTGGTTATTTACACTGGTTTCA
CGCTTCCCGTCGATTACATGCATGGATGGGCCCGATGGATGAATTACCTCAATCCTGTTG
CTTATGCGTTTGAGGCAGTAATGGTGAACGAGTTCCGAAACAGAAGGTTCCCTTGTGGAC
TTTACGTTCCTTCCCGGTCTTTCTACAACTCTGTGCCCGCTGAGTCCAAGTCTTGTGTGG
CTATCGGCGCCAAGCTCGGCCAGGACTACGTCGATGGCTCCGTGTTCATCAGCACGGCCT
ACAAGTACGAGACTGGACACCTGTGGCGAAACCTGGGCATTCTGTGGGCCTTTGCTGGCT
TTTTCTGCGGCGTCTACCTGCTTGCTGCCGAGTACGTGACCATGGCCCAGTCCAAGGGTG
AGGTTCTGCTGTTCAAGCGATCCCAGCATCGAAAGAACCTCAAGGCCAAGCCTGACAAGC
GATTCCAAGACGTTGAGCTTGGAGACAACCTCGGCGACCACAACTTGGACCAAAACCTCG
GCGACAACCACTCGACGTACTCTTACCAGCAACCCATCCAGGCTCAGATTCCCCCTTCTC
GGTACGCCCAGCAGGCTCCCATGACTCCCGCTCCTATGATGCATGTCCCCATGACTCCTG
GTGGCATGCTTTCTCCCGGTCAGCAAATGTTCTCTCCCGGTCAGCAAATGATGACGCCTG
GTCCCATGTCACCCGCAGGCATGATGACTCCCGGTTTTACATATGTGCCCCCCCATGGAG
ACACTATTCACCAACCGCCTACCGTTGGAGACGACATCAACTACACGACTCCCGCGCCCC
AGGTGAACTTCACCCCTGCCACTCCAGCTCAGTACACTACTCCCGCCACCCCAGCTCAGT
ACAACACTCCTGGCACCCCTGGTATTACTGGTGGGTACGAGCCCCCTCATGGAGACACTG
TTCACATGCCCCCCACAGTTGGTGATGACACAAACTACATTCCCACCAAGGTTCGCACCA
ACCTGTCTCTCAACTCGTCCAAATCTAACTTGCAGCACTCTGGAGTGTTCCAATGGACCG
ATGTTTGCTACGATATCAAGGTTGCTGGTGAGAACAAGCGATTGCTGGACCATATCGACG
GTTACGTGAAGCCCGGTACCCTCACCGCTCTCATGGGAGCTTCTGGTGCTGGAAAGACTA
CTCTTCTTGATGTGCTGGCTGATCGAAAATCCACTGGTATTGTTCATGGAGACATGTTGG
TCAATGGCCAGCAGCGAAACGCCTCTTTCCAGCGAAAGACCGGATACGTTCAACAGCAGG
ATTTGCATACTGCCACTGCCACTGTTCGTGAGTCTCTCGAGTTCTCAGCTCTGTTGCGAC
AGCCCTCTTCTGTGTCTCGAGCTGACAAGCTGGCTTACGTCGATGAGGTCATTTCTATTC
TTGAGATGGATTCTTACGCTGATGCCGTTGTTGGTGTTCCTGGTGAAGGTCTTAACGTGG
AACAGCGAAAGCGTCTGACTATCGGCGTCGAGCTTGCTGCCAAGCCCGAGCTGCTGCTTT
TCCTGGATGAGCCTACCTCCGGTCTGGATTCCCAGACTGCTTGGTCTATCGTCTCTCTGC
TCAAAAAGCTGGCTGCCAACGGTCAGGCTATCCTGTGTACCATCCATCAGCCCTCTGCCA
TTCTGTTCCAAGAGTTTGATCGACTTCTGTTCCTGGCAGCCGGTGGAAAGACAGTGTACT
ACGGAGACCTCGGTGATAAGGCGTCTCTGCTCATTGAATACTTTGAAAGTAACGGTGCTG
ACCCTTGTCCTGATAACGGTAACCCTGCCGAATGGATGCTGGAGGTAATTGGTGCTGCTC
CTGGTTCCCGGGCCAAGAAGGACTGGCCCTCAGTCTGGCGATACTCCCAGCTTCGACGAC
AACAGCGTGAGGAACTCGATGATATGCGTCTTGCATTCAACGCTGACTCTCAGGCAGCTC
TTGCAGTTGGAGGAGAAGACACTGATTTCGCCGTGTCTCAGTGGACCCAGCTGTACTACG
TTACCAAGCGACTGCTGCAGTTCCACTGGCGAACTCCCTCCTATCTGTGGTCCAAGATGA
CTCTGTGTATTGGTTGTGCTCTGTTCATTGGTTTCTCCTTCTACAAGTCGGCTCGAGACA
TTCAGGGTCTTCAGAACCAAATGTTTAGTATTTTCCTCATGTTCCTGATTTTCACCACAG
TTGCCGAGCAGATTATGCCTCTTTTCATGATTCAGCGAGACTTGTACGAGGCTCGAGAGC
GTGCTTCCAAGACTTACTCGTGGCAGGTGTTCCTCGGCGGAAATATGCTCGCGGAGCTTC
CCTGGCAGATTATCGTGGCGGTTGTCGTCTTCTTCTGCATGTACTACCCCATTGGATTCT
ATCGAATTGCGGCTGAGAACCACCAGACACAGGAGCGAGGAGCTCTCTACTTCCTCTTCC
TGCTGGTCTTCTTCATTTACGACTCTACCTACGCTCACATGATTGGTGTCATGTTCAACA
ACCACGAGACGGCAGCCAACTTTGCATACCTGCTCTTCTCCTTCTGTCTTATGTTCTGTG
GTGTGCTGGCCACGAAGGAGTCCATGCCTGGATTCTGGATCTTCATGTACCGAGCGTCGC
CTCTGACATACTTCATTGGCGGTTTCATGGCCACTGGTTTGGCCGGAGGAAAGGTGACAT
GTTCGCAACATGAGATTTTGCAGTTCAAGCCTCTCAAGGGCAACTCTTGTGCACAGTACA
TGAAACCCTTCCTGGACAATGCTGGCATCTTCAAGGGCTACCTGCTCAATGAAACTGCCA
CCGACATGTGTCACTATTGCCCCATCGAGAACGCTGATGCCTACCTCGACAATGCCTCCA
TTTTCTATGGAGACCGATGGCGAAACTTTGGCATTGTGTTTGCCTATCCCATCTTCAACG
TTTGTGCCACCTTTATGCTCTACTACGTTCTTCGAGTTCCTGGCGTGCGATACAAGATTG
CGTCCAAGGTCCGATGGCGACGAAAGAAGCAGTAAGGTGCTATTTATGTATCTATTTATT
ACTAATCATAATGTCATTTTGAAAACAACTC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E14729g_CDS-001

Protein length: 1660 aa.
Product: Plasma membrane ATP-binding cassette (ABC) transporter
Gene: ABC1

>YALI0E14729g_CDS-001 MAHYYPSGVSSVGNFDSLDVEIRSLAEGMVHKPHHRESRYIFDHTFDDEFREEHEDEYDY
DMLRKTSFENPDVNPYVEASAEPELDPWSGEFNSRKWIKTVLGLKERFGNSKGITAGVSF
KNLGAYGYGSRSDYQKTFLNVIVATGDLLRSAIGAKRTSKIQILRKCDGLVLPGETCVVL
GRPGSGCTTFLKSIACETYGFHVEEETQWNYQGVPRDVMTKHCRGEIVYNAEHDIHFPHL
TVGQTLMFAALARTPRNRVLGVTREQYARHTRDVTMATLGLSHTINTKVGSDLVRGVSGG
ERKRVSIAESVVCGAPLQCWDNSTRGLDAANATEFIRSLRLSAQMTGASMFVSLYQASQE
AYDMFDKVCLLYEGRQIFFGKAGEATSYFEGLGFERAHRQTTGDFLTSLTNPVERRIKAG
WEKLVPRTPEEFESRWRSSRTHALLVYNIDRFNTTHPLGGQGYVEFMKLRKESQARNTRL
SSPYLLSWPMQVRLCLWRGFLLVRGDLSMTLMTIIGNFIMALILASMYYNLRESTDAFFS
RSALLFLAMLLNAMASVLEIFVLYGQRPLIEKHKRYALYHPFAESIASMLVDLPTKLATL
ISVNLALYFMTNLRRTPGAFFIFLLFSFTCTMAMSMIFRFTASVTKTMEQALAPASVLVL
ALVIYTGFTLPVDYMHGWARWMNYLNPVAYAFEAVMVNEFRNRRFPCGLYVPSRSFYNSV
PAESKSCVAIGAKLGQDYVDGSVFISTAYKYETGHLWRNLGILWAFAGFFCGVYLLAAEY
VTMAQSKGEVLLFKRSQHRKNLKAKPDKRFQDVELGDNLGDHNLDQNLGDNHSTYSYQQP
IQAQIPPSRYAQQAPMTPAPMMHVPMTPGGMLSPGQQMFSPGQQMMTPGPMSPAGMMTPG
FTYVPPHGDTIHQPPTVGDDINYTTPAPQVNFTPATPAQYTTPATPAQYNTPGTPGITGG
YEPPHGDTVHMPPTVGDDTNYIPTKVRTNLSLNSSKSNLQHSGVFQWTDVCYDIKVAGEN
KRLLDHIDGYVKPGTLTALMGASGAGKTTLLDVLADRKSTGIVHGDMLVNGQQRNASFQR
KTGYVQQQDLHTATATVRESLEFSALLRQPSSVSRADKLAYVDEVISILEMDSYADAVVG
VPGEGLNVEQRKRLTIGVELAAKPELLLFLDEPTSGLDSQTAWSIVSLLKKLAANGQAIL
CTIHQPSAILFQEFDRLLFLAAGGKTVYYGDLGDKASLLIEYFESNGADPCPDNGNPAEW
MLEVIGAAPGSRAKKDWPSVWRYSQLRRQQREELDDMRLAFNADSQAALAVGGEDTDFAV
SQWTQLYYVTKRLLQFHWRTPSYLWSKMTLCIGCALFIGFSFYKSARDIQGLQNQMFSIF
LMFLIFTTVAEQIMPLFMIQRDLYEARERASKTYSWQVFLGGNMLAELPWQIIVAVVVFF
CMYYPIGFYRIAAENHQTQERGALYFLFLLVFFIYDSTYAHMIGVMFNNHETAANFAYLL
FSFCLMFCGVLATKESMPGFWIFMYRASPLTYFIGGFMATGLAGGKVTCSQHEILQFKPL
KGNSCAQYMKPFLDNAGIFKGYLLNETATDMCHYCPIENADAYLDNASIFYGDRWRNFGI
VFAYPIFNVCATFMLYYVLRVPGVRYKIASKVRWRRKKQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG