| Description | Tyl6, ENA|AJ746250 Yarrowia lipolytica LTR- retrotransposon Tyl6 |
|---|---|
| Locus type | mobile_element |
| Gene name | Tyl6 |
| Locus tag | YALI0E14388t |
| Species | Yarrowia lipolytica | Positions | 1723614..1728721 |
|---|---|---|---|
| Strain | CLIB 122 | Strand | Sense |
| Chromosome | YALI0E | Total length | 5108 (nuc.) |
| Previous locus | YALI0E14366g | Next locus | YALI0E14421r |
Here is a representation of the structure of the locus YALI0E14388t oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :
By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.
>YALI0E14388t
TGTAATGATTCGGAGACACTCATAAGATGTCAGTGGGAGGCACGTGACATAGAGACTAGG
GTTACGTGGAAGGCACGTGCCTGTGTGACTGCGAGTGCCCAAATAGGACATGCGGGGTAC
TCGCCTTTGGAGGTATAAGAAGGATTATTGTATATGATTAATTGATTAGCTTATTATTGA
AGTTCGACGAGACCAGTAGATCCAGGAGCGCAGTATTGAGACTAGCAGCCTTGGATAGAG
TATTACGACAAGAGATAGTACGCCCGATCTGTTACACGTGGTAGCGATGCATCCTCAACA
AACTAGAACACTTCGAAGTTCCCGAACAGTTTCGAGTCGGTGTGGCCGTCGTGGCCATGA
CCGGCCTTGCAGAGGAATGGTGGTTCGACAGTGGTAGGGCCGCTCTGGGCGCAGACGCCA
GAGATTGGAAGAAATTCACCCAGGCCCTCGAGAGCCGATTCACTCCCTCGACTTACGCCA
TGAACATGGAGGAGGACTGGAGCAATCTGCAATGTGGGCCCAACGAGTCATCCTATTCCT
ATGAGACACGCTTCCGAGCGGCACGACACCACCTGTCCAGAGAGGCCGCCCCAGAGGAGG
CCTGGTTACGGCTGACCAGTGGTATGAAGGACATGTGGCGACGTGAGATCATGAAGCAGG
GCCCCATACTGCAGAACAACGTCGAGGAGACCCTGCGTCATATGCACATTGTGGCAGGCG
CAGAATACTTCCCAGGAGCTCACGCCCAGACACCCGCGGCCGCACCTGTGGCCACACCTA
CATCCACCAGCCAGTACGGTCCTGGACCGATGGAGGTGGACAACGCGGTGCTGCTCAAGG
CTATGATGGAATCGCAGGAGGCCAGCCAGAAGCGAATGATGGAACAGCAGACCCATATGG
TTGAACTGATGGCAAACGCCATTGGACGAGCTAACAACAACGGCTCCCAAAACGGCCGCA
ACAACCGTGGTGGCCGTGGTAACTACTACAACCAGCGAACCTCTCGTGAGTGCTACACCT
GCGGCAAGATTGGCCACCTGGCTCGTGACTGCCGACATCGTGAACGTGTTCAGGAACTGA
TTCAACAGGACCAGGGAAATGTGCGACAGCAGTAATGACCGAGACCATTACTGCTGAGCC
ACTCGAAGATCTCGAATCGGTGAGTGTGCCACCTGCGGAGTATGATATAATCAATAAATC
CAACTTTGTAGAGGACACTACCGGAGAACCGGAGGATGCAGGGGTAGAGGTGCATCTGGA
GGAAGAGCAAACGGAGGAACCAATGCAGCTGGAGGAAGAACAAGTGGGGGAACAAGTGGA
GGAACCACTGATTGCTGCACGAGTTGAGGTGGTAGATGGTAAGCGGCGACGAGCCTTGAT
CAAGGGCGACCGACCACCGATCTCGATCCCGTACTGCTACAACGGTACCACAGTGCAGGC
GTTGTTGGACTGTGGCGCGAGCTCGTGCTTCATTAGCAGGAACCTGGCTGAGAAATTAGG
CCTGAAAATGACGCCCTGCAAACCACGACAAGTCCAGTCCGTGCATAGCATGGAGACAAC
CAACTATACTGTGGAAGTACCGGTTGAGCTGGGTAAGTGGGGTTGCGACGTGTTTGCGTA
CGTCTTACCCCAGATGGTCGGACAAGAGCTACTATTAGGCATGCCCTTCTTCGAAGAGTA
TCATGAAGCCGTGGATTTCAAAGCTCGAACGTTCACACCCGACGGGTACGAGGTACCGGC
ATGGCCAGCTAACGAGTCAACTACGTGGGACAAACACGGCCACATCAAGTCGTGCTCACT
AGAGAAAGCTACGCAGCTGGCCGAACACCACGGTGCGCAGCTGTTCCTCTACATGGTACG
GGAGAAGCCAGAGGGGGAGGAGCATGAGCCGGATGTCGATACCCGAGAGGTGCTGGAGGA
GTATGCAGATGTGATTGTTGACAAAATGCCAATGGAGCTACCTCCGAAACGGAGCGTAGA
ACATACCATCGACTCCGATGAGACGGCACGACCTCCAGCCAGGGCATCGTATCGACTTAC
CCGATTCGAATGGGCTGAGGTCGACAAGCAGGTAAACGACTTGTTGGAGCGAGGAATCAT
CCGACCATCGAAGTCACCTTACAGCGCACCGTTAGTGATTGTAAAAAAGAAAGGAGGTGA
ACTTCGTATCTGCACAGACTATCGCGCCCTCAACGAGCTTACCACCAAGGATCGATTTCC
GCTGCCCCGTATCGATGACATTCTGGATTGCCTTGACGGCGCCGACACCTTCTCCAAGTT
CGATCTTTTGTCGGGCTACTGGCAGGTGTTGGTAAAAGAGTCTGATGTACACAAGACGGC
CTTCTCGACTCGATCGGGACATTATGAGTACCTGGTAATGCCGTTCGGTCTATGCAACGC
TCCCGCCACCTTCCAGAGATTGATGAATGACGCCCTACGACCATTCCTTAACAAGACAGT
CTGTGTGTATCTTGACGACATCATCGTGTTCAGCCGAAACCGAGAGGACCACAAACGACA
CGTGAGGGAAGTCTTGGACGCCCTGAGAGCACAGAAGTTCTATGCCAAGAAGTCGAAATG
TGAGTTATTCAGGAAGAAGATGGGATTCCTGGGCCACGTGGTGTCTGCGGCAGGAGTGGA
GCCAGACCCTGAGAAAGTGAAGGTTGTGGAAGAGTGGGTACCTCCCAACACGCCGAAAGG
CCTCTTGAGCTTTCTAGGACTGACTGGGTATTATCGACGGTTCATCGAAGACTACGCTAA
AATCGCCGCCCCACTCACAGACGCTGCCACATTGTCGCCAACTGACTTTAAATGGACTGA
GGCATGCCAGGTGGCGTTTGAACAGATGAAGGCGAAGCTAGTATCGAACGAGGTCATGAT
CATACCTACAATGGAGGACACGTTCAAGGTGAGTACGGACGCGTGCGATATTGCGATGGG
CGGAGTACTACAGCAGTGGAGTCCCAAGGACCAAGAGTTCCGACCTGTGGCATATGAGTC
CACGAAGTTCAAGAAACACGAGATGAACTACCCGACGCGTGAGAAGGAATTCTATGCTAT
CATCCATGCCCTACGGAAGTGGCGACACTACCTACTTGGCCGACCGTTCTTGATTGAGAC
AGATCATCAGTCTCTGAGTTACTTTACGTCCCAGACACACCCTCCCAGTGGACGACTGAG
TCGATGGCTCGACTTCCTAGCGGAATACGACTTTGAGATCAAGTACGTGCCGGGCAAAGA
CAACGACGCAGCCGACGGGTTGTCTCGTATGTTGGCACAGACAGCGATGGTGTTCGAGCC
GGACGACTCGTTGCTAGACATCATCAAGCAGGGCTATGAGTCGGACGAGTACTTTAAGGA
CGTCTTCAAGGTACTGGCCACGGAACCGGTGGTCATCCCCAAAGAGATGCACAACCACGC
CCGCCATTTCCGATACGACAAGAACACAGGACTGCTGTATTTCGCCTCCGTTTACAAGGG
GGAGGGAGAGCGACTCTGCGTGCCAAGAGGTAAGGCCAGAAAAATGCTGATGAAGGAGGC
TCATGACGCACCCCTTGCTGGTCACTACGGATACTTCAAAAGCTATGAAAGGCTGGCGAG
GGCTTACTACTGGCCACGAATGATAGACCACATGCGCAACCACACCAGATCCTGTCTGAT
CTGCCAGACCACGAAGGCCAGACGAGCACCACCCCAGGGCTTGCTGAAGCAGCTGCCGGT
ACCGACGGGAAATTGGCAGGAGATCACAATGGACTTCATTGGAGGCATCCCAACGACCCA
TCGAGGCCACAACAATATCTGGGTCACGGTTGATAGGATGTCAAAGATGGTACATCTGAT
TCCTTGCAAGACGAGCACGGATGGAGAAGAGTTGGCGGACATGTACATTGACCGCATTGT
TCGATATCACGGAGTACCTCGTTCGATCGTGTCGGACAGGGACAAGCTATTCACAGCAAA
GCTATGGCAGACGTTACAGACACGTCTAGGCACAGAGTTGAAGTTTTCCACAGTCAATCA
CCCCCAGACTGATGGACAGTCAGAACGAGTGAACACCGAGCTGATTCGACAGATGAAGCA
ACACTTCGTCACGGACAAAAACTGGGACCTCTGGTTACCTGTCATCGAGTTTGCGATGAA
TTCTGCAAAGCATTCGTCCACCGGATACGCACCCTTCGAGGCGGTGTATGGATACATCCC
AGACGGACCAACGTATGCCTCGACTCGAGAGCTCACCAAGGTACACCATCAAATGGACGC
TTGGATGGACAAACTACGGGCTATTTCCAATTCGATGCACGACCGATTAATCGAGCACCA
ACGGGTCCAGGAGAACAGGGTGAATCAGCATCGAGTGCCAGTCGCGTTTCAGATTAACGA
CCAAGTCTTGGTACATCGGAAGGCGTTCTTTGACAAGGCCAAGTACGCAAAGATGTATGA
CGTCTACTTTGGACCATTTCCCATCGAGAAGAAGATTGACACCAATGTCTACAAGGTGCA
GCTACCATACGACTCGACTCGACACAAGAATATCAATGTACAACACTTGAAGAAGTTCAT
ACCTCGACCTGAGTATGACATCAACCCACCCAGTACGGAGTACTCTCAAGAATGCAGCCT
GCATCAGATCACCAGCCTGGTGGGTATTGATGACGACCGTTACTTCGTAACTTGGGAAGA
TTGTGACCCCTCTATTGCCTCTTCAATTTCGAAAGAGATGTTCCACCGCATCCCTAAAGA
CAAACGGGATTCACTATTGGATCAATGGAACCAGTTCATTAAGACCCCTGCGGAAAGCGA
GGACTATGTGGACATCTCCTAGGGGGGGAGAGTGTAATGATTCGGAGACACTCATAAGAT
GTCAGTGGGAGGCACGTGACATAGAGACTAGGGTTACGTGGAAGGCACGTGCCTGTGTGA
CTGCGAGTGCCCAAATAGGACATGCGGGGTACTCGCCTTTGGAGGTATAAGAAGGATTAT
TGTATATGATTAATTGATTAGCTTATTATTGAAGTTCGACGAGACCAGTAGATCCAGGAG
CGCAGTATTGAGACTAGCAGCCTTGGATAGAGTATTACGACAAGAGATAGTACGCCCGAT
CTGTTACA
Locus sequence
Up/downstream sequence
Protein length: 253 aa.
Gene: Tyl6
Protein length: 1489 aa.
Gene: Tyl6
Browse the locus neighborhood with JBrowse:
ATG