YALI0E14190g - MDH2

Overview

Description uniprot|Q6C5X9 Yarrowia lipolytica YALI0E14190g MDH2 peroxisomal malate dehydrogenase; uniprot|Q6C5X9 Yarrowia lipolytica YALI0E14190g MDH2 cytosolic malate dehydrogenase
Locus type CDS
Gene name MDH2
Locus tag YALI0E14190g

Location

Species Yarrowia lipolytica Positions 1702729..1704267
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1539 (nuc.)
Previous locus YALI0E14168g Next locus YALI0E14212g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E14190g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E14190gYALI0E14190g_mRNA-001YALI0E14190g_CDS-001YALI0E14190g_mRNA-002YALI0E14190g_CDS-002

Nucleotide sequence

 

>YALI0E14190g
ACTAACAAATTCAAAAGTGAGTATCATGGTGGGAGTCAATTGATTGCTCGGGGAGTTGAA
CAGGCAACAATGGCATGCACAGGGCCAGTGAAGGCAGACTGCAGTCGCTGCACATGGATC
GTGGTTCTGAGGCGTTGCTATCAAAAGGGTCAATTACCTCACGAAACACAGCTGGATGTT
GTGCAATCGTCAATTGAAAAACCCGACACAATGCAAGATCTCTTTGCGCGCATTGCCATC
GCTGTTGCCATCGCTGTCGCCATCGCCAATGCCGCTGCGGATTATTATCCCTACCTTGTT
CCCCGCTTCCGCACAACCGGCGATGTCTTTGTATCATGAACTCTCGAAACTAACTCAGTG
GTTAAAGCTGTCGTTGCCGGAGCCGCTGGTGGTATTGGCCAGCCCCTTTCTCTTCTCCTC
AAACTCTCTCCTTACGTGACCGAGCTTGCTCTCTACGATGTCGTCAACTCCCCCGGTGTT
GCCGCTGACCTCTCCCACATCTCCACCAAGGCTAAGGTCACTGGCTACCTCCCCAAGGAT
GACGGTCTCAAGAACGCTCTGACCGGCGCCAACATTGTCGTTATCCCCGCCGGTATCCCC
CGAAAGCCCGGTATGACCCGAGACGATCTGTTCAAGATCAACGCTGGTATCGTCCGAGAT
CTCGTCACCGGTGTCGCCCAGTACGCCCCTGACGCCTTTGTGCTCATCATCTCCAACCCC
GTCAACTCTACCGTCCCTATTGCTGCCGAGGTCCTCAAGAAGCACAACGTCTTCAACCCT
AAGAAGCTCTTCGGTGTCACCACCCTTGACGTTGTCCGAGCCCAGACCTTCACCGCCGCT
GTTGTTGGCGAGTCTGACCCCACCAAGCTCAACATCCCCGTCGTTGGTGGCCACTCCGGA
GACACCATTGTCCCTCTCCTGTCTCTGACCAAGCCTAAGGTCGAGATCCCCGCCGACAAG
CTCGACGACCTCGTCAAGCGAATCCAGTTTGGTGGTGACGAGGTTGTCCAGGCTAAGGAC
GGTCTTGGATCCGCTACCCTCTCCATGGCCCAGGCTGGTTTCCGATTTGCCGAGGCTGTC
CTCAAGGGTGCCGCTGGTGAGAAGGGCATCATCGAGCCCGCCTACATCTACCTTGACGGT
ATTGATGGCACCTCCGACATCAAGCGAGAGGTCGGTGTCGCCTTCTTCTCTGTCCCTGTC
GAGTTCGGCCCTGAGGGTGCCGCTAAGGCTTACAACATCCTTCCCGAGGCCAACGACTAC
GAGAAGAAGCTTCTCAAGGTCTCCATCGACGGTCTTTACGGCAACATTGCCAAGGGCGAG
GAGTTCATTGTTAACCCTCCTCCTGCCAAGTAAGTATACATCACGCATCAGGGAAGCGCA
CAAAGTGCCTTCCTACTGATCTTTCCCCCATTTGAACTACACGATCACTAACCATTCTAG
CTAGGATCTAAAACTTTGCCTTTGAAATGATAGAGTCCAGTCGGCTAAGTATATAGCTAT
TTAAACGTATTTGCGATAAACAGAGAGTGTACCTGTTGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E14190g_CDS-001

Protein length: 333 aa.
Product: Cytoplasmic and peroxisomal malate dehydrogenase
Gene: MDH2

>YALI0E14190g_CDS-001 MVKAVVAGAAGGIGQPLSLLLKLSPYVTELALYDVVNSPGVAADLSHISTKAKVTGYLPK
DDGLKNALTGANIVVIPAGIPRKPGMTRDDLFKINAGIVRDLVTGVAQYAPDAFVLIISN
PVNSTVPIAAEVLKKHNVFNPKKLFGVTTLDVVRAQTFTAAVVGESDPTKLNIPVVGGHS
GDTIVPLLSLTKPKVEIPADKLDDLVKRIQFGGDEVVQAKDGLGSATLSMAQAGFRFAEA
VLKGAAGEKGIIEPAYIYLDGIDGTSDIKREVGVAFFSVPVEFGPEGAAKAYNILPEAND
YEKKLLKVSIDGLYGNIAKGEEFIVNPPPAKI*

YALI0E14190g_CDS-002

Protein length: 332 aa.
Product: Cytoplasmic and peroxisomal malate dehydrogenase
Gene: MDH2

>YALI0E14190g_CDS-002 MVKAVVAGAAGGIGQPLSLLLKLSPYVTELALYDVVNSPGVAADLSHISTKAKVTGYLPK
DDGLKNALTGANIVVIPAGIPRKPGMTRDDLFKINAGIVRDLVTGVAQYAPDAFVLIISN
PVNSTVPIAAEVLKKHNVFNPKKLFGVTTLDVVRAQTFTAAVVGESDPTKLNIPVVGGHS
GDTIVPLLSLTKPKVEIPADKLDDLVKRIQFGGDEVVQAKDGLGSATLSMAQAGFRFAEA
VLKGAAGEKGIIEPAYIYLDGIDGTSDIKREVGVAFFSVPVEFGPEGAAKAYNILPEAND
YEKKLLKVSIDGLYGNIAKGEEFIVNPPPAN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG