YALI0E13860g

Overview

Description weakly similar to uniprot|Q12303 Saccharomyces cerevisiae YLR121c YPS3 GPI-anchored aspartyl protease 3 (yapsin 3)
Locus type CDS
Locus tag YALI0E13860g

Location

Species Yarrowia lipolytica Positions 1667693..1668829
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1137 (nuc.)
Previous locus YALI0E13816r Next locus YALI0E13882g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E13860g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E13860gYALI0E13860g_mRNA-001YALI0E13860g_CDS-001

Nucleotide sequence

 

>YALI0E13860g
ATGTTCTTTTCGTTCCCTGCTCTTCTGGCTCTTCTGGCTCTCTCAGCTCTTTCAGTAGCT
GCACCCTCCAACCCCAAGGTGGTGTCTATGGATGTCTCTAAAAAGACATACCTAGGGTCG
GTCAAGGGGAGACCTGGGGTCTATATTTCCACATACATCAGTGTGGGCACTCCTCCTCAG
TCATTCGAAGTCAGCTTTGATACAGGATCTTCTGATCTATGGATACCAGCCGTGGGTGAT
GACCAAACTGGAGGTCCAGGGCTCTTCAACCCCCAGGCTTCCTCCACGTTCAAATCTTTA
GGAACCAGTTTCAACGCGGCATACGTCGGAGGAACAGCCCAGGGATACTGGGTGACCGAT
AATGTCAACGCAGCAGGCCTGTCTCTGTCCAATCTGCAACTTGGAGCTGTTTCTAACATG
CAAGACCAGAAGCAAGGAATCTTGGGTGTGTCTTTCAAGCAAGTAGAAATGTCGGTACGA
AATGGACAACCCCAGTACTACAACTTTCCGTTTTCCGCCAAAGAACAGGGCTTTATTGAC
CATGTGCTCTACTCTCTCCATTTTGACGGTCCCCATTCTCCTGACGGAACCTTTCTACTG
GGAGGTATTGACCACGCCAAATACTCTGGAGATCTCCATTACTACAACGTCGCCAACCCC
AGTGCAGGTCCCCAGATTAATTTCAAGAGCCTCGTACTTGACGGACACGAACTCGACTTC
AATCTGCCGGTCACACTGGACTCAGGGTCGCTAGCTATTGCCTTTCCAGACACCCAGTTC
AGAGCTATAGGAAGCGGGCTTAACCTGACCAACTACAACAAAGATATGGGTCTGTATTAT
ATCGACTGTCAAGCGGAGATCTCCGTGGACTTCAAATTCGACGGACTCACAATCTCAGCC
AACTCTTCGTCTTTGGTACTGCCCATGGGATTCTTCTCAGGGGACACCACAGACCCTTCA
TGTGTACTGGGAGTGCAAAACTCTGCCCTTTATGAATCTCCGAATGATGCTGTTCTCGGA
GAACCTTTCCTTAAGAACGCCTACGTCGTCTACGATTTGGAGGACTACAGCATTGGACTA
GCTCCTGCTGTCTACACCGACAAGTCTGATGTTCAAGCTGTCTCCCGCACATTGTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E13860g_CDS-001

Protein length: 379 aa.
Product: Conserved hypothetical protein

>YALI0E13860g_CDS-001 MFFSFPALLALLALSALSVAAPSNPKVVSMDVSKKTYLGSVKGRPGVYISTYISVGTPPQ
SFEVSFDTGSSDLWIPAVGDDQTGGPGLFNPQASSTFKSLGTSFNAAYVGGTAQGYWVTD
NVNAAGLSLSNLQLGAVSNMQDQKQGILGVSFKQVEMSVRNGQPQYYNFPFSAKEQGFID
HVLYSLHFDGPHSPDGTFLLGGIDHAKYSGDLHYYNVANPSAGPQINFKSLVLDGHELDF
NLPVTLDSGSLAIAFPDTQFRAIGSGLNLTNYNKDMGLYYIDCQAEISVDFKFDGLTISA
NSSSLVLPMGFFSGDTTDPSCVLGVQNSALYESPNDAVLGEPFLKNAYVVYDLEDYSIGL
APAVYTDKSDVQAVSRTL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG