YALI0E13794g

Overview

Description weakly similar to uniprot|P32505 Saccharomyces cerevisiae YGL122c NAB2 nuclear poly(A)-binding protein
Locus type CDS
Locus tag YALI0E13794g

Location

Species Yarrowia lipolytica Positions 1665505..1667027
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1523 (nuc.)
Previous locus YALI0E13750g Next locus YALI0E13816r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E13794g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E13794gYALI0E13794g_mRNA-001YALI0E13794g_CDS-001

Nucleotide sequence

 

>YALI0E13794g
ATGGCAGACATTTTGAAAAACGACGATGCTCTCAAGGAGCAGTTTGAGAAGAACATTTTA
CAGCGGGCCACGCAGGTTATGGGCTCAGAGCAGGACCCGACTCTGGGGCAGTACATTGTG
ATGATGCTGCTAGACGACTACGTGACCGAGGACACAATCAAGTCAGAGGTGAAGCAAATG
ACCGAGGGGCAGCTCAGCGACGACTTTGTGGCGTGGTGCAAGGACGAAATGGGTCGCGTG
GCAAAACACGGCGGTGCGGTACAGGAGGACACAGAAATGGAGGATGAATACAGCGTGGGG
TCTATGCCTGGCCGACGGAAAACAGAGAGCGTTTTCAAGGGCAGACAGGATCGAAGTGCG
TTTGGAGGCGTGGGCAAGTCGCTCAAGGATCGGGTCGGCCGAAACGGCGTGTCCAAGGCA
TTCAGCAAGGAGGGGGAATATAGCATCAGGAGCAAGCCCACATCTACCGGGGGAGTTCCT
ACGGGTTCTGTAGGAGGCATTCCGACGGACGCACAGCAGGCCATGTTCGCGACGATGCAG
AAAGCGCTGTCGATGGATCTTCCGCCAAAGGAGCGGTTCAACCATCGGTGCCGAAACTGG
CCCAACTGCAACTACGATAACTGCAAGTACGTGCATCCCACAGAGGCATGTGAGGCGTTT
GCCAACGGTGGAGCGTGTGCTGCTCCTCCTGGCACGTGTCTCAAGGTGCATGTTGGCCAG
GATATCGATGATCTGGCCAACCTTCCCGAGCAGCCCAAGCCGTTTGAGTGGGTGCCCTAT
GAGAGATACAAGCCTGCAGTTCCCAAGGGCTTTATGCTCATGCCCATGATGACTCCCCAA
GGCCCCCAACAGGTCATGGTTCCCCAGGTGCCCGTGAAAACGACCATCATGGAGTGTCGG
TTCACAGACCGGTGTGCCAACCAGCATTGCACTTATGGCCATCCTACTCCATGCAACAAT
GAGGCCAAGATCACCGACCATTTTGCGTGGTGCGACAATAAGGAGCACTGTGCGGATCCT
GAGTGTGTCAAGAACCATCCGTCGTCGTCGTTGGTGCGTGAGAATGAGTCTCTTCCCTCA
GGCCAGACTCTGGAGCAGTGCAAGTTCAACAACTACTGCACCAACCCCAAATGTCGGTTC
CGACATGCCATGTCCAAGACCATTTGTCGAAACGGAAAGGAGTGCACCCGAATGGACTGC
ATCTTCATGCATCCCGTGGAGACGCCATGCAAGTATGGCGTCAACTGTGCCAACAACAAT
TGTATCTTCTCGCATCCCGAGGGTCATGGAAACGGCACTGCTGAGCGAAAGTTTGTGAAT
GAGGCTGAGGGAACTGAAAAGCTCATTCCTGGCCAGCAGCAGCAGCAGGATGTTGAAGGT
TCCACTGTTGACGCCGATACCACCATGGAATAGGCTGTTGTGTCAATGCCATACGCCGTT
CCAAAATATAGCTTGGTCATTCGGACCACGGTAAATTATTGTAATATATATATTATTATT
GACCCAACTGTGGGTTTGAGATG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E13794g_CDS-001

Protein length: 471 aa.
Product: Conserved hypothetical protein

>YALI0E13794g_CDS-001 MADILKNDDALKEQFEKNILQRATQVMGSEQDPTLGQYIVMMLLDDYVTEDTIKSEVKQM
TEGQLSDDFVAWCKDEMGRVAKHGGAVQEDTEMEDEYSVGSMPGRRKTESVFKGRQDRSA
FGGVGKSLKDRVGRNGVSKAFSKEGEYSIRSKPTSTGGVPTGSVGGIPTDAQQAMFATMQ
KALSMDLPPKERFNHRCRNWPNCNYDNCKYVHPTEACEAFANGGACAAPPGTCLKVHVGQ
DIDDLANLPEQPKPFEWVPYERYKPAVPKGFMLMPMMTPQGPQQVMVPQVPVKTTIMECR
FTDRCANQHCTYGHPTPCNNEAKITDHFAWCDNKEHCADPECVKNHPSSSLVRENESLPS
GQTLEQCKFNNYCTNPKCRFRHAMSKTICRNGKECTRMDCIFMHPVETPCKYGVNCANNN
CIFSHPEGHGNGTAERKFVNEAEGTEKLIPGQQQQQDVEGSTVDADTTME*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG