YALI0E13750g

Overview

Description similar to uniprot|P38623 Saccharomyces cerevisiae CLK1 CMK3 RCK2 YLR248W (ohnolog of YGL158W) Protein kinase involved in the response to oxidative and osmotic stress; similar to uniprot|P38623 Saccharomyces cerevisiae CLK1 CMK3 RCK2 YLR248W (ohnolog of YGL158W) Protein kinase involved in the response to oxidative and osmotic stress; similar to uniprot|P38623 Saccharomyces cerevisiae CLK1 CMK3 RCK2 YLR248W (ohnolog of YGL158W) Protein kinase involved in the response to oxidative and osmotic stress
Locus type CDS
Locus tag YALI0E13750g

Location

Species Yarrowia lipolytica Positions 1660787..1663518
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 2732 (nuc.)
Previous locus YALI0E13728g Next locus YALI0E13794g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E13750g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E13750gYALI0E13750g_mRNA-001YALI0E13750g_CDS-001YALI0E13750g_CDS-002YALI0E13750g_mRNA-002YALI0E13750g_CDS-002

Nucleotide sequence

 

>YALI0E13750g
ATGCCCGTTTTTGAAAACCTCAAAAACTTCATTCGGCATGGAAAACAGGCCCAGAACGGC
CTGGAGCCCATCTCGTCCCGTAACTCGGGCCGACGAAGCCAACAACCGCCCGCCATCACC
CACAGTAACAGTGAGCCGCTGACCAAAACCACAATGTTCAGCGAGGGCGCAGCTCAGACC
AAGGAGCCCGCACCGGCCGCCAAAGCCGCTGCTCCCGCCAAAAAAGTCGACAAGGAGAAG
TACAACGACGCGATCAAGGAGATTGTGGAGGAGGAGAAGCTGCAACAGAGCAAAATTCCC
AACTACCCGGGACTCGAGAGATACAGGCTGATTGAAAAGATGGGAGAGTGAGTATGAGAA
ACGGGAGGGAAACATGGGGTTGTGTATGGTGACAGGCGGATGCTTACGACGGCCATATAT
ATGGCCATTCTGGATGTCTGTCGTTCAATTTCCTTGGGTCATGGTGTGATGATGGGAGTA
TGGTTAAAGTGTGTGCTCACACTTGTTAATTATTTTGTGACACGCTCGCTTACATCATGT
TCACCATGGACGGTGAGGACATAGTGTCTGGCCATGTCCAGCTACTACATCCACACACTC
GGACCTGACTACACCACTTGACACAAGTCACATGTCACTAGCGCGAATTTCCAACCATGT
TGGTAATAAGCATAATGGCCTGCAAAACAGGTGGAGGCGTTTGAGACACGTGACGACGCA
AGAAGAACTGATACCCAGTGTACTTGTAGCGCTGTTCCGTGCTTCACGCGCCAATGGGCT
CTAAATACCACCCGCGCTAAACCCGCATAAGTGTGCGGTTAGTACATTATCTCAACATGC
TAACATAGTGGCGCATTTTCCATTGTCTACAAGGCAGTGGATCTCCAGACCAAGGAGGAG
GTGGCCGTCAAGGTCATTCGGAAATTTGAACTAAACGCCAATCAGGTGAGTCTTGTGAGG
AGAGAGGAGTGAGAGAGTGAGAGAGTGAGAGAGCGAGAGAGAGAGAGAGAGAGAGAGAGA
GAGAGAGAGAGAAGAAACGAATGCTTGTGCCTACACTCAGGAAAGAAAGACACCACTGAC
ACAAGTCGCGACATTTAGGAAACAAGGCTAAGCATGAACAAAAGGCAACACAGGTGGGTT
AATGAAGGATCAGGGATTGAGGTGGTTATACCCGCAGTCGCAAAATACTAACTCAGCGTT
CGAGTATCCTCAAGGAGGTGGCAATCATGCGTCAATTACGGCACAAGAATGTGGTGCAGC
TCATTGATTTTAGCGAAAGCGAAAACCACTACTTCATTGTTTTGGAGCTTCTTCCTGGAG
GAGAGCTGTTCCACCAGATTGTGCGTCTGACGTACTTTTCCGAAGACCTGGCCCGACACG
TGATTGTCCAGGTCGCAGAAGCAGTACAATACTTGCATGAGGAGGTAGGAGTGGTGCATC
GAGACATCAAGCCCGAAAACCTGCTCTTCTACCCTGCTCCCTTCACCCCTAGCAAGAAGA
TTGTGTTGAGAAAGGGTGAGGACGAGAGCAAGGAAGACGAGGGTAAGTACATTCCCGGCG
TGGGAGCCGGAGGCATTGGGGTTATTAAGCTGGCTGATTTCGGACTTTCCAAGGTGGTCT
GGGACAGCAAAACCATGACTCCTTGTGGTACTGTTGGATACACCGCTCCTGAGATTGTCA
AGGATGAGCGGTATTCGAAATCTGTCGACATGTGGGCTCTGGGGTGCGTTCTGTACACTA
TTCTGTGTGGCTTCCCTCCCTTCTACGACGACAGTATCGATGTTCTGACCGAGAAGGTCG
CTCGAGGACAATACACTTTCCTGTCTCCCTGGTGGGATGAAATCTCCAAGGGAGCCAAGG
ATCTCGTTTCACATCTGCTGACGGTCGATCCCGAGCGTCGGTACACAATTGAGGACTTTC
TGGCTCATCCCTGGATCACCCAGAGCAACGAGCCCACCCATCCTGCTTTGGATTCTCCCA
TGGCGTCCATTTTGGACCAGCGAAAGGGCCACACTCCCGCCACGACTGCCATTTCGCGAG
AGAACGTCGAGGCCGAAGATCCTCAACCCCACGACTCTGCATCAACTCTGCATGTCGAGC
ACCCTGCCGAGGGCGCCTCCACGTCGTCGTTTGAGGATCCTCAAGCAACGTATCGGTCGC
CGGCCACTGTCACCCTCAAGGAGGTGTTTGACGTGTCCAACGCAGTGCATCGAATGGAGG
AGGAGAATGCGCGACGTCGCCGAATGGGCGGCTCCAAGAATCTCGGCATGTTGACCGAAA
TCATCACCGACGAAGAGGACGAGGAAGACGACACTCTGGAGGGAAGCATGTCTCGAGTGT
CGGTGGCCGAGAACCCTCACGCCCACAAGCGCCAGAAGCAAAAGAACCGATCAGGCGTGT
TTGAGCTCAAACTTGACGGCGCCACGTTGCTTGAGAAGCGAAAGAGAGCCGCTGCCGGTG
TTGCATAGCGCGCAGCGTCTGTCGCTCTTGTTCTGAGTTATCGAACGGCATTTTTTATAT
CTACAAATCAAACGGGGCAAAAAATCAACCAGAGACTTCAAAAAATCAAACGTTTGCACT
TGTACATTTTAGCACGATGGACAGTTTGCACCACGGATCTACGGGTTCCTTGTGTGCGAG
AGAGAGCAGGGCTCGAGTTGCACAATGACACACAAAGGTAAGGAATTGGAGGGATAATTC
GCAGTAATAAAGTGAGGGTATGTATGACTATT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E13750g_CDS-001

Protein length: 588 aa.
Product: Protein kinase involved in response to oxidative and osmotic stress, putative

>YALI0E13750g_CDS-001 MPVFENLKNFIRHGKQAQNGLEPISSRNSGRRSQQPPAITHSNSEPLTKTTMFSEGAAQT
KEPAPAAKAAAPAKKVDKEKYNDAIKEIVEEEKLQQSKIPNYPGLERYRLIEKMGDGAFS
IVYKAVDLQTKEEVAVKVIRKFELNANQSRHLGNKAKHEQKATQRSSILKEVAIMRQLRH
KNVVQLIDFSESENHYFIVLELLPGGELFHQIVRLTYFSEDLARHVIVQVAEAVQYLHEE
VGVVHRDIKPENLLFYPAPFTPSKKIVLRKGEDESKEDEGKYIPGVGAGGIGVIKLADFG
LSKVVWDSKTMTPCGTVGYTAPEIVKDERYSKSVDMWALGCVLYTILCGFPPFYDDSIDV
LTEKVARGQYTFLSPWWDEISKGAKDLVSHLLTVDPERRYTIEDFLAHPWITQSNEPTHP
ALDSPMASILDQRKGHTPATTAISRENVEAEDPQPHDSASTLHVEHPAEGASTSSFEDPQ
ATYRSPATVTLKEVFDVSNAVHRMEEENARRRRMGGSKNLGMLTEIITDEEDEEDDTLEG
SMSRVSVAENPHAHKRQKQKNRSGVFELKLDGATLLEKRKRAAAGVA*

YALI0E13750g_CDS-002

Protein length: 572 aa.
Product: Protein kinase involved in response to oxidative and osmotic stress, putative

>YALI0E13750g_CDS-002 MPVFENLKNFIRHGKQAQNGLEPISSRNSGRRSQQPPAITHSNSEPLTKTTMFSEGAAQT
KEPAPAAKAAAPAKKVDKEKYNDAIKEIVEEEKLQQSKIPNYPGLERYRLIEKMGDGAFS
IVYKAVDLQTKEEVAVKVIRKFELNANQRSSILKEVAIMRQLRHKNVVQLIDFSESENHY
FIVLELLPGGELFHQIVRLTYFSEDLARHVIVQVAEAVQYLHEEVGVVHRDIKPENLLFY
PAPFTPSKKIVLRKGEDESKEDEGKYIPGVGAGGIGVIKLADFGLSKVVWDSKTMTPCGT
VGYTAPEIVKDERYSKSVDMWALGCVLYTILCGFPPFYDDSIDVLTEKVARGQYTFLSPW
WDEISKGAKDLVSHLLTVDPERRYTIEDFLAHPWITQSNEPTHPALDSPMASILDQRKGH
TPATTAISRENVEAEDPQPHDSASTLHVEHPAEGASTSSFEDPQATYRSPATVTLKEVFD
VSNAVHRMEEENARRRRMGGSKNLGMLTEIITDEEDEEDDTLEGSMSRVSVAENPHAHKR
QKQKNRSGVFELKLDGATLLEKRKRAAAGVA*

YALI0E13750g_CDS-002

Protein length: 572 aa.
Product: Protein kinase involved in response to oxidative and osmotic stress, putative

>YALI0E13750g_CDS-002 MPVFENLKNFIRHGKQAQNGLEPISSRNSGRRSQQPPAITHSNSEPLTKTTMFSEGAAQT
KEPAPAAKAAAPAKKVDKEKYNDAIKEIVEEEKLQQSKIPNYPGLERYRLIEKMGDGAFS
IVYKAVDLQTKEEVAVKVIRKFELNANQRSSILKEVAIMRQLRHKNVVQLIDFSESENHY
FIVLELLPGGELFHQIVRLTYFSEDLARHVIVQVAEAVQYLHEEVGVVHRDIKPENLLFY
PAPFTPSKKIVLRKGEDESKEDEGKYIPGVGAGGIGVIKLADFGLSKVVWDSKTMTPCGT
VGYTAPEIVKDERYSKSVDMWALGCVLYTILCGFPPFYDDSIDVLTEKVARGQYTFLSPW
WDEISKGAKDLVSHLLTVDPERRYTIEDFLAHPWITQSNEPTHPALDSPMASILDQRKGH
TPATTAISRENVEAEDPQPHDSASTLHVEHPAEGASTSSFEDPQATYRSPATVTLKEVFD
VSNAVHRMEEENARRRRMGGSKNLGMLTEIITDEEDEEDDTLEGSMSRVSVAENPHAHKR
QKQKNRSGVFELKLDGATLLEKRKRAAAGVA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG