YALI0E13728g

Overview

Description similar to uniprot|P47058 Saccharomyces cerevisiae YJL035c TAD2 tRNA-specific adenosine deaminase 2
Locus type CDS
Locus tag YALI0E13728g

Location

Species Yarrowia lipolytica Positions 1659955..1660675
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 721 (nuc.)
Previous locus YALI0E13706g Next locus YALI0E13750g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E13728g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E13728gYALI0E13728g_mRNA-001YALI0E13728g_CDS-001

Nucleotide sequence

 

>YALI0E13728g
ATGACTACAAAATACGAATACCATTCGGGCTTCATGGAAGAGGCTCTCGAACAGGCAGAA
CTGTCGCTCAACAATAACGAGGTGCCTGTGGGATGCGTGTTTGTGCACAATGGCAAGGTG
ATTGCCAGAGGCATGAATGACACAAACAAGAGTCTGTGTGGAACCCGCCACGCCGAGTTT
CTGGGTATCGAGCACATTCTCAAGACACACACGGCCGATATCTTTGAAGAGGTCGATCTC
TACGTCACAGTGGAGCCGTGTATCATGTGTGCATCTGCTCTGAGACAGCTCAAAATCAAG
TGCGTGTACTATGGATGTGCAAACGACCGGTTTGGCGGCTGTGGAAGCGTCATGAGCATT
CACTCGGACAAGGGAGTCGACCCTACCTACAAGGCATACCCCGGATTCTACCGTGAAGAG
GCCATCATGTTGTTGAGACGGTTCTATTGCCAGGAGAACGAAAATGCCCCTACCGAGAAG
AAGGAGAACAAGAAACAACGAGAACTGAAGACGGCCTTTCAACCGTTTGATTTCACCAAA
TATGTGCATTCGGAGGAGGAGTTTGTCGAGGTTTACGGCGAGGAATATTTGCATCTATAC
CAGGAGAGTCTGAAGGAAAAGCTCAAGGAGACTGGCAAGGGAGAGAAGAAGAGAAAAACC
AAAAAGTAGACACGGACACGCATTATAGACATCAACTAATATACACACATTTACATCTAC
A

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E13728g_CDS-001

Protein length: 223 aa.
Product: Subunit of tRNA-specific adenosine-34 deaminase, putative

>YALI0E13728g_CDS-001 MTTKYEYHSGFMEEALEQAELSLNNNEVPVGCVFVHNGKVIARGMNDTNKSLCGTRHAEF
LGIEHILKTHTADIFEEVDLYVTVEPCIMCASALRQLKIKCVYYGCANDRFGGCGSVMSI
HSDKGVDPTYKAYPGFYREEAIMLLRRFYCQENENAPTEKKENKKQRELKTAFQPFDFTK
YVHSEEEFVEVYGEEYLHLYQESLKEKLKETGKGEKKRKTKK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG