YALI0E13662g

Overview

Description similar to uniprot|O94412 Schizosaccharomyces pombe Putative rab geranylgeranyltransferase alpha sub unit
Locus type CDS
Locus tag YALI0E13662g

Location

Species Yarrowia lipolytica Positions 1653523..1654659
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1137 (nuc.)
Previous locus YALI0E13640g Next locus YALI0E13684g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E13662g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E13662gYALI0E13662g_mRNA-001YALI0E13662g_CDS-001

Nucleotide sequence

 

>YALI0E13662g
ATGGTAAGTGTCTCGAGTCCGCTGTTGCCACCCGATTTCCACTAACCCAGCATAACGTGC
GCAAGCAGAAATACTCGGCCGAGCAGTTGGCAGAAAAAAAGCAGCTAGAAAAGGGCAAGA
TCAACGCCTACAATGGCCTCTCGACACAGGTGAACCAGTTTCGCCGAGAAGGAAAACACG
ACAAGGAGGCGCTGGATCTCAATACCAAGCTGATTAAGATCAACCCCGAGTTTTACACAA
TGTGGAATTACCGACGAGAAATACTGAAGACCGGAATCTTGCCCAATCTGGAGGACAAAG
ACGACTTTCTGGATGGAGAGCTCAAGTTTGTTCAGGAATGTTTGATGCGGTTCCCCAAGA
CCTACTGGCTGTGGAACCATCGAAAATGGTGTTTGGAAACTGCCGCAAAGCCGGATTGGA
AAAAGGAACTGGCCATGGTAACTTATGCTCTTGCCAAAGACGAACGAAACTTCCACGCAT
GGAACTACAGACGATATGTGCTGGCCAAGTACGAGGAGACGCTCCCTGAGGCCCACAGAG
GCGCTGTCAAGCCCAAAGAGTTTGAATTCACCGAGGAAAAGATCAACAAGAACTTCTCAA
ACTTTTCCGCCTGGCATCAGAGATCAAAGGTCATTCCAGAACTCATGGAGGAAACACGCC
AGGGAAAGTGCACAGACGAGAAGCTGGTAAAACGTCTCAGTGATCCCAAGACGTTTTTCG
GCTCGGAATTGGACTACGTGAAGAATGCTATCTTTATGGACCCCAACGACCAGTCTGTTT
GGCTCTACTTACGATGGTTGTTGACCAAGCCTGAAATCATCTATCCTGATATTTCTACCG
AATACCACATTGAAGTAGTGGAGTCCACCATCAAAGAAATTGCGGAGTTGTACGAGGATG
AGAAAGACTGCCGTCATTGCATTTATTGGATTGTCTTTTACACCATCATGCTTTATGAGC
TCAAGAAACAGAGAATACCCGAAGCTGTTGGTAGAACTCTTACCAAACACATTGGTGACC
TCAAGGAGAAGGATGCCCTTAGAAAGGGCCAATATGAAGACTGGGAGAAGGTGGTGGTTT
CAGCTCACTGAAACCAGGACGGTGTTGTAAGATCTAATGCATGAAATGAATGACTTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E13662g_CDS-001

Protein length: 348 aa.
Product: Geranylgeranyltransferase alpha sub unit, putative

>YALI0E13662g_CDS-001 MHNVRKQKYSAEQLAEKKQLEKGKINAYNGLSTQVNQFRREGKHDKEALDLNTKLIKINP
EFYTMWNYRREILKTGILPNLEDKDDFLDGELKFVQECLMRFPKTYWLWNHRKWCLETAA
KPDWKKELAMVTYALAKDERNFHAWNYRRYVLAKYEETLPEAHRGAVKPKEFEFTEEKIN
KNFSNFSAWHQRSKVIPELMEETRQGKCTDEKLVKRLSDPKTFFGSELDYVKNAIFMDPN
DQSVWLYLRWLLTKPEIIYPDISTEYHIEVVESTIKEIAELYEDEKDCRHCIYWIVFYTI
MLYELKKQRIPEAVGRTLTKHIGDLKEKDALRKGQYEDWEKVVVSAH*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG