YALI0E13189g

Overview

Description weakly similar to uniprot|Q02875 Saccharomyces cerevisiae YPL105C (ohnolog of YBR172C)
Locus type CDS
Locus tag YALI0E13189g

Location

Species Yarrowia lipolytica Positions 1587645..1591194
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 3550 (nuc.)
Previous locus YALI0E13167g Next locus YALI0E13211g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E13189g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E13189gYALI0E13189g_mRNA-001YALI0E13189g_CDS-001

Nucleotide sequence

 

>YALI0E13189g
GGAAGCGTAAGTGTACTTGTAGCTACCTTGAGCTCTTGATCCACACATCGAAACACAAAA
CGACGCCAGCAAAACGCCCTCAACAACCAACTATCCAACAACAACCCACTTATCATCACC
TTAGCAATGTCACAGTCTTCTCTTTCTTTTGGTCCCGAATGGTGAGTATATTGTCTACGG
ACTTTAAAGGTCAAGGAGCACGTTGGCGGCCGGGGTACGAGTACTACGGAGGCTTGACAG
AGCAGACGAGAGTACGAAAGCGTCGATATCTTGAGATAAGCACGTCATGTGGCATGTGTG
AGTCACGGAGCTTCTACAGAGACTTCTCCAGGGAGCTCTTTTTTGGGCACAGGTACAATC
AAATTGTGTGTGTGATTTTGCCTTGACAGACACCACGGTGGTATCCTGGTATGGACACCT
CACGACTACACTTGTACTGCGCCGCTGTGACACGACACGATAAGGACACGTTATCATCTG
CCCCGGCGCCGCTCTCGGTGTCGTTATCCACCACTCATGTCTGTTATCTACACCAACACC
AACTCTGCCTCAGTCGTATCACCAGTGTCGTACTAACTCAGGATGCGCCCGAAATCCAAG
GCGCCCGACGGAAAAACACCACTACCAGCTGTGGTTCCCAATGGCAATAAGGCCAAAATG
GCGTGGTCCGGAGTCGCCGCAGGCAAGGTGGTCACGTCTGTGCCCACTGAAACCAAAAAA
CTGAGTTTTGCCTCTGCCGCCACTACCACCCCTCGCAAGTTCAAGAAACGCGACCTGGAG
GAACCCGAGGATCTGCGCTCCGATGTAGGTTCGGGCTTGTTGGCTGAAAATTCGGAGCCC
GTGCCACCCGAGTCTCTGGGTGACCTCGCGTCTCCATTGCTGCCCAACCACGGAGGACAA
CGGTTTTCGGCCGAAGATATGCTTGCAGTATGGCGAAACATGAAGGACAAGAACGTTCTG
GTCAAAACGGAGGTAAACAACCAATCCATGTACCAGAGCATTCATCTCAACACCCCTTCG
CTGCTGCAGAAGGACCAGGGTGCCGGAGGTTCGCTGATGTCCAAGGACCGAGAGGGATGG
TCTCCATTCAAGAGCGTAAGCGTGGTGAGTTCGGTTGAATCTCCCTCTCAAGGACACCAG
TCACTGCACCAGCCCCAGCAGCAGCAAGCGCAACAGCAGCAAGCGCAGCATCAACATCAA
CAGCAATATCAGGCCGATCCTTCTGCCCCCTCTTCCGCTGCCATGTCGCCTACCACGGGA
ACGGTGCCCTCGGTGTTTGACACGTTCAATGCTCCCGCTGTGCCTCCCGGGATGGGTTTT
ACAGCCTCCCCACCCAAGTTGCAGCATCCTGAAAACATCAAGTGGATGTACAAGGACTAC
CAGGGCATAATCCAGGGTCCGTTTGCTGGTCCCGTTATGCACACTTGGTGGAAGGGCGGC
CATCTGGATGCCAAGCTGCTCATTCGACGTGAGGATGACGACGTGTGGCAGACCGTGGAC
GAGCTCATTTCTAAGACCAGCACCCAGGAGCCGTTCCTGACCCCCTTGCCGTTTGTTGCT
AAGCAACCGCCCGTGATCAATACGCAGACGGCTTTCTCGCAGCAGTATCAGCAGCCTGGA
GTCCCGCAGCAGCAACAGCAGCAGCAGCAACTTCAAGGCCAGCAGCAGCAGCAAGGAACT
CCCCAGCAAGGAGGATCCTTTCAGGGCTCTACTTCTTCCTTCCAGCACTATCCCCAGCAT
CTGCATGGTAGTGTATCATCCTGGGGAAGTCCTGCTGTGACCCCCATGTCTCCCACACCC
TGGGGTGGTTCTCAGATGGGCGGTCAGGCGACCCCCAATAACAATTTCGGCGGTGGAGGC
TCGTTTTTCGACCAGCCCTTCCATGGAGGGCATTCGCAGTCGTCTTTCTTTGACGACAGA
AGCATGTGGCGAAGTGGCAGCGTCAGCAACACCATGTCTCCTGCTTTGTCGCGAGCTTCG
TCCGTCATTTTCCCCAACGACGGTCCCCATACTCCTACCCGGGCCGGATCTCATACTCCT
CTTGCGGCTGCTGCTTCCACTGCCGATGTGACTGCCGCTGACAACGAGCTGCTTGAGCTG
GATTCGCTGCCCCTGCATCTGAAGGATGTGATTGGAGATGATTTGGAGGAGGTTCCAACC
ATCAAGGAGGAGGAGCCTGAGAAGAAGGAGATGAAGGACGAGGGCAAAAAGGACGTGGAG
CCCAAGAAGGAGGCCAAGGAAGAGCCTGAGGAGCCTCTTACTGCCAAGGAGCGGGCCAAG
CGAGAGCGAGATGCCGCCAAGAAGGAGAAGAAGCGGAAGGAGAAGGAGGAGAAGCAGCGA
ATCAAGGAGAAGATGGCTGCTGAGAAGGCCGAGCGATTGGAGCGGGAGGCTCGGGAGAAG
GCCGAGAAGGCGCGTCTTGAGCAGCTCCGGATCGAGCAGGAGGCCATTGACCGGGAGGAG
GCCAAGAAAGCCGAGGCTGAGAAGGCCGAGCGGGCTCGACGGATTGAGGAGGAGCGACTG
GCAAAGGAGGCCCGAGAGAAGGAGGCGCCCTGGACCGCCAAGGAGAACAAAAAGAAGGAG
AAGCCCAATAAAATGTCTCTGGCTGAGATCCAGCAGCTGGAGGAGTTTGAGCGGCAGAAG
AAGGAGGCCGAGGAAAAGGAGCTTGCCAATGCGATCCGAGCTATTGAGGAGGCTGAGCTG
CAGCAAGAGAATTCTCTGTCTGCTTCCCGAGACGAGCCCTCTTTCAAGCCCACCTGGGCC
ACTGCTCCTGTGGCCTCTGCTCCTGCCAAGTCTCTGAGCCAGATTCAGAAGGAGGAGGAG
GCTGCTCGAAAGAAGAACACAATCACTCCGGCAACCGCTGTTTCCTCAGGAGGAGTAAAG
AAGTACGCTGACGTGCTTCCTCGGCGAGCCCCTGTCCCCGCTGCTGCTGCTGTTCCCGAC
GCTGCTTCTCCCTGGACTACTGTAGGAGCCCACGGTAAGCGAATGGGAGAGGATGGAATG
CCTGTTCGAGCCCAGACCCCTACTGCCCCTGCTGCTCACATGGCTCACCAGTACGCCGCC
CAGCAGGCCGCTGCTGCTCAGCATCAGGCTGCTCTTGCAGCTCGCCCCTCTGCGCCAGTG
GCTCCCGCTGCCCCCAAGGTGCTCACTCCCGCTGAGTCTTTCTTGCAATGGTGCCATGGA
GCTCTCAGAGGTCTAAACGCCGGAGTCAATGAGACCGAGCTGATCGGTATGCTCATGACT
CTGCCTGCAGAGGAGGAGTCCACCGAGATCATTGCCGACATTGTGTACGCCAACTCGTCG
ACTCTGGACGGTCGACGGTTTGCTGCCGAGTTCCTCAAGCGAAGAAAGATTGCTGATGGT
GACTCTGCTGTCAAATGGAGCGAGGTGATTCAGCATGCCGAGGTTGCTCCTCAGGATGAT
GGATGGAACACCGCCTTCAAGGTGGTTGGCAAGAAGAAGCGGGCTCCTTAGGGCTCTTTA
GGGCTCCTTAGGGCTTCCTCGGAGGACATGTATTTATGTATAAGTAATGGGCAATTATTG
TACAATGAGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E13189g_CDS-001

Protein length: 964 aa.
Product: Conserved hypothetical protein

>YALI0E13189g_CDS-001 MMRPKSKAPDGKTPLPAVVPNGNKAKMAWSGVAAGKVVTSVPTETKKLSFASAATTTPRK
FKKRDLEEPEDLRSDVGSGLLAENSEPVPPESLGDLASPLLPNHGGQRFSAEDMLAVWRN
MKDKNVLVKTEVNNQSMYQSIHLNTPSLLQKDQGAGGSLMSKDREGWSPFKSVSVVSSVE
SPSQGHQSLHQPQQQQAQQQQAQHQHQQQYQADPSAPSSAAMSPTTGTVPSVFDTFNAPA
VPPGMGFTASPPKLQHPENIKWMYKDYQGIIQGPFAGPVMHTWWKGGHLDAKLLIRREDD
DVWQTVDELISKTSTQEPFLTPLPFVAKQPPVINTQTAFSQQYQQPGVPQQQQQQQQLQG
QQQQQGTPQQGGSFQGSTSSFQHYPQHLHGSVSSWGSPAVTPMSPTPWGGSQMGGQATPN
NNFGGGGSFFDQPFHGGHSQSSFFDDRSMWRSGSVSNTMSPALSRASSVIFPNDGPHTPT
RAGSHTPLAAAASTADVTAADNELLELDSLPLHLKDVIGDDLEEVPTIKEEEPEKKEMKD
EGKKDVEPKKEAKEEPEEPLTAKERAKRERDAAKKEKKRKEKEEKQRIKEKMAAEKAERL
EREAREKAEKARLEQLRIEQEAIDREEAKKAEAEKAERARRIEEERLAKEAREKEAPWTA
KENKKKEKPNKMSLAEIQQLEEFERQKKEAEEKELANAIRAIEEAELQQENSLSASRDEP
SFKPTWATAPVASAPAKSLSQIQKEEEAARKKNTITPATAVSSGGVKKYADVLPRRAPVP
AAAAVPDAASPWTTVGAHGKRMGEDGMPVRAQTPTAPAAHMAHQYAAQQAAAAQHQAALA
ARPSAPVAPAAPKVLTPAESFLQWCHGALRGLNAGVNETELIGMLMTLPAEEESTEIIAD
IVYANSSTLDGRRFAAEFLKRRKIADGDSAVKWSEVIQHAEVAPQDDGWNTAFKVVGKKK
RAP*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG