YALI0E12947g

Overview

Description some similarities with uniprot|P38750 Saccharomyces cerevisiae YHL008c
Locus type CDS
Locus tag YALI0E12947g

Location

Species Yarrowia lipolytica Positions 1562138..1563207
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1070 (nuc.)
Previous locus YALI0E12903r Next locus YALI0E12969g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E12947g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E12947gYALI0E12947g_mRNA-001YALI0E12947g_CDS-001

Nucleotide sequence

 

>YALI0E12947g
ATGAGCAGTCGCGACGTGATCAGGGCCCTGGCACCCCTCATTCCGCCCGAGGAGTGTGCT
CTGGAGATGGTAGCGGTGGCCCGTCGTAAACACCGACAGGGCTGGATCAAGCTGTTTGTC
AGCTCCGTATGTGGAGGAATCATGCAATCCATTGGAGCCTTCGTCAGTATCACGGTACAA
GGAAACTCGATTTCGGGCCAGCATGTGGGTGGGGCAAACGACTGGCTGCCAAAGGTCCCA
GAGGCTGGCGCCTACTCCATCGGACTGATTCTCATCACCATGTTTGGTCTGGACCTGTTC
AACTCCAACATTCTTTTTTTCACCGTGGGCTGCGCGACCCGCAAGCTGTCACCGTGGGCT
CTTCTAAAGTCGTGGGTGGTGTCGTGGTTTGGAAACCTGGGAGGAGCTCTGTTTGTCAGC
TACATTTTCGCCTACTCCACCGGCCTGGCACGATCGGAAGGAATGGTGAACGCATCCTAC
GTGTCTGTCAACAACAAGCTGACAAACCCAACTTGGGCTCAACTGTTTGCACGGGCAGTG
GCCTGTAATGCACTGGTGTGCATGGGTATCTATCTGTCGTTCATGTGTCGAACATTTGTG
GCAAAGTACATTGCCATTCTCATCCCGGTGTTTGCCTTCGTATACATTGGGTTCGACCAT
GTGGTGGCAGACATGTTTCTCATCAGTTTGGGCCTGTTCAATGGCTCACCGCATAGTGTC
GGGCTTTTCATTCACAAGTCGTTAGTGGGAGTCTCTGTCGGAAACATTGTTGGAGGCAGC
GTCTTCGCGCTCGTGGTGCCGTGGTATCTGCACTACTTCACCGTTTCGGCTCTGCACATC
AAGGATTCCATTGCTGGTGTCAATGCCGACGGAGTCCAGATCGGTACCGAAGTGGGAGAA
GAAGAACCAAAGGAAGAGCCGTCTTCGTCTTCGGCCGGAGAGTCGTTCAATCCTCCGCAG
GCCCCCGCTTCGGCGCGTATTGCACCCCATGCACAGTCGCCAGTCTGATGCATTTGATAG
AATATTTATACAAGTTTTGATATAGAAGTAATCGCATGAGTTGAAGACGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E12947g_CDS-001

Protein length: 336 aa.
Product: Conserved hypothetical protein

>YALI0E12947g_CDS-001 MSSRDVIRALAPLIPPEECALEMVAVARRKHRQGWIKLFVSSVCGGIMQSIGAFVSITVQ
GNSISGQHVGGANDWLPKVPEAGAYSIGLILITMFGLDLFNSNILFFTVGCATRKLSPWA
LLKSWVVSWFGNLGGALFVSYIFAYSTGLARSEGMVNASYVSVNNKLTNPTWAQLFARAV
ACNALVCMGIYLSFMCRTFVAKYIAILIPVFAFVYIGFDHVVADMFLISLGLFNGSPHSV
GLFIHKSLVGVSVGNIVGGSVFALVVPWYLHYFTVSALHIKDSIAGVNADGVQIGTEVGE
EEPKEEPSSSSAGESFNPPQAPASARIAPHAQSPV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG