YALI0E12859g - FAT2

Overview

Description uniprot|Q6C634 Yarrowia lipolytica YALI0E12859g FAT2 Peroxisomal protein that binds AMP and mRNA, putative
Locus type CDS
Gene name FAT2
Locus tag YALI0E12859g

Location

Species Yarrowia lipolytica Positions 1557206..1558886
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1681 (nuc.)
Previous locus YALI0E12837g Next locus YALI0E12881g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E12859g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E12859gYALI0E12859g_mRNA-001YALI0E12859g_CDS-001

Nucleotide sequence

 

>YALI0E12859g
ATGGCGACTCTTCAGAAAACGATTTCCAAGACCGGAGCCGGGATCTTCATCCCCGGCGCC
CAGGAGCTGACCTACAGCCAGTTCTTCGATCTCATTGGCGACTTCCAGAAACAGCTTGCC
CAGGTCGGTCTTCCTCCCCAGAGTGCTGTTTCCATTGCCATCCCCAACTCTCTCGAGTTT
GCCGTGACCTTCCTGGCAGTCACCTTCTCTCGATACATTGCTGCTCCTCTCAACTCGGCG
TACAAAAAGTCCGAGTTTGAGTTCTACATCGACGATCTCAAGTCCAAGCTGGTGCTGGTA
CCCAAGGGAGCCGTGGCCCAGAACCTGGCCTCCGTTCAGGCTGCCCGAACTTTTAATGCT
GCCATCGCTGAGGTCTACTGGGACGACCAGAAGAAGCGAATTGTCATGGACATCAAGGAG
GGCCCTACAAACCCTCCCGTTGCCGTCCCCACCCCCGACGAGGTCTCCCCCGAAGACGTG
GCTCTCGTGCTGCACACCAGTGGAACCACCGGCCGACCTAAGGCCGTTCCCCTGACCCAG
CGAAACCTGTGCCGAACCATGCACAACATTGTCGACACATACAAGCTCACCAGTAAGGAC
ACCACTTATCTGGTCATGCCTCTGTTCCACGTCCACGGTCTTCTGTGTGCCTTCCTGGCC
CCTCTGGCCTCTGGTGGAGGAATCGTAATCCCTAGCAAGTTCTCTGCCTCGCAGTTCTGG
GACGACTTTGTCAAGTACAAGTGCAACTGGTACACTGCCGTGCCCACCATCCACCAGATT
CTGCTGAACACAAAGATTCCCCAGCCTCTGCCCGAGATCCGGTTCATTCGATCGTGCTCT
TCGGCCCTGGCACCCGCCACCTTCCACCAGATTGAAAAGGCATTCAAGGCCCCCGTCCTG
GAGGCTTACGCCATGACTGAGGCTGCCCATCAGATGACTTCTAACAATCTTCCTCCCGGA
CAGCGAAAGCCTGGAACCGTCGGAGTTGGCCAGGGTGTCGAAGTCGCCATTCTGGACGAC
AACGGAGACGAAGTCCCTCAGGGAAAGATTGCCGAGATCTGTATCCGAGGAGAAAACGTC
ACCAAGGGTTACATCAACAACCCCGAGGCCAATAAGTCGTCGTTCACCAAGAGCGGTTTC
TTCCGAACCGGAGATCAGGGCTTCCTGGACAAGGACGGCTTTGTCAACATCACCGGCCGA
ATCAAGGAGCTCATCAACCGAGGAGGAGAGAAGATCTCACCCATTGAGCTTGACGGAGTC
ATGCTGGAGCACCCTGCCGTGGCCGAGGCTGTGTGTTTCGGTGCACCCGATGAGATGTAC
GGACAGCAGGTGAATGCCGCTATCGTTCTCAAGAAGGACGCCAAGGCCACTGAGCAAGAT
ATCAAGGACTTCATGGCTGATAAGGTCGCAAAGTTCAAGATTCCTGCTCGAGTTTTCTTC
ACCGACATTATGCCCAAGACTGCCACTGGTAAGATTCAGCGAAGATTTGTCGCCCAGAAG
TTCCTTGACAAGGCTAAGCTCTAAGCATCTGACTGGCCTCAACCCCGAACATGTACATTA
TATTTAGCCTGTGTGTGAATTATTTTAATTGACAGAAGAGAGCCCGTGTTGCGTTGGCGT
TTCTAATATGCGGCTTGTCAGAAGGTCTAGATTTCTGATTGGCACTCTCGATGGAAGATT
G

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E12859g_CDS-001

Protein length: 508 aa.
Product: Peroxisomal protein that binds AMP and mRNA, putative
Gene: FAT2

>YALI0E12859g_CDS-001 MATLQKTISKTGAGIFIPGAQELTYSQFFDLIGDFQKQLAQVGLPPQSAVSIAIPNSLEF
AVTFLAVTFSRYIAAPLNSAYKKSEFEFYIDDLKSKLVLVPKGAVAQNLASVQAARTFNA
AIAEVYWDDQKKRIVMDIKEGPTNPPVAVPTPDEVSPEDVALVLHTSGTTGRPKAVPLTQ
RNLCRTMHNIVDTYKLTSKDTTYLVMPLFHVHGLLCAFLAPLASGGGIVIPSKFSASQFW
DDFVKYKCNWYTAVPTIHQILLNTKIPQPLPEIRFIRSCSSALAPATFHQIEKAFKAPVL
EAYAMTEAAHQMTSNNLPPGQRKPGTVGVGQGVEVAILDDNGDEVPQGKIAEICIRGENV
TKGYINNPEANKSSFTKSGFFRTGDQGFLDKDGFVNITGRIKELINRGGEKISPIELDGV
MLEHPAVAEAVCFGAPDEMYGQQVNAAIVLKKDAKATEQDIKDFMADKVAKFKIPARVFF
TDIMPKTATGKIQRRFVAQKFLDKAKL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG