YALI0E12683g - MET6

Overview

Description uniprot|Q6C638 Yarrowia lipolytica YALI0E12683g MET6 Homocysteine methyltransferase
Locus type CDS
Gene name MET6
Locus tag YALI0E12683g

Location

Species Yarrowia lipolytica Positions 1541615..1544042
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 2428 (nuc.)
Previous locus YALI0E12661g Next locus YALI0E12705g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E12683g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E12683gYALI0E12683g_mRNA-001YALI0E12683g_CDS-001

Nucleotide sequence

 

>YALI0E12683g
CAACACCCAAACTAATCAATCATGGTCCTTTCATCTGTCCTTGGTTTCCCCCGAATCGGT
GCCAACCGAGAGCTCAAGAAGATCACGGAGTCCTACTGGGGCCAGAAGGCCTCTGTCGAC
GAGCTGTTCAAGGTCGGCAAGGAGCTCCGAGAGATCAACTGGAAGAAGCAGAAGGATGCT
GGCGTCGACATCATCCCCTCCAACGACTTCTCTTTCTACGATCACATTCTCGACCACTCC
CAGCTCTTCAACGTGATCCCCGAGCGATACGCCAAGTACAACCTGGCTCCCATCGACACC
GTCTTCGCCATGGGCCGAGGTCTGCAGCGAGACAACGTTGACGTCCCCGCCCTGGAGATG
GTCAAGTGGTTCGACTCCAACTACCACTACGTCCGACCCACCTTCACCAATGCCACCGAG
TTCAAGCTCAACGGCCAGAAGCCCGTCGACGAGTACCTTGAGGCCAAGGCTCTCGGTATC
GAGACCCGACCCGTTCTCATTGGTCCCGTTTCCTTCCTTGCCCTCGGTAAGGCCGACACT
GACTCTCTCGACCTCGAGCCCATCACTCTCCTCGAGAAGCTCCTCCCCGTCTACACCGAG
ATCCTCCAGAAGCTGCACGCTGCCGGCGCCAAGACCGTCCAGATCGACGAGCCCGTTCTT
GTCCTTGATCTGAACGAGAAGGTCCAGGCCGCTTTCAAGACTGCTTACGATTACCTTGCC
AAGCAGAAGGACATTCCCGAGATCACCATTGCTACTTACTTCGGTGATGTTCGACCCAAC
CTCAAGGCCATTGAGGGTCTCCCCGTTGCTGGATTCCACTTTGACTTTGTCCGAGTGCCC
GAGCAGCTCGAGGACGCCATCAAGCTTGTTGGTGACGACAAGACTCTGTCTGTCGGTGTC
ATTAACGGCCGAAACATCTGGAAGACTGACTTCGCCAAGGCCATCAAGGTCGTTGAGCAG
GCCAAGGAGAAGCTCGGTGACCGAGTTGTCGTTGCCACCTCCTCTTCTCTCCTCCACACC
CCCGTTGACCTTGCCAACGAGCACAAGCTGGACCCCTCCATCAAGGACTGGTTTGCCTTT
GCCACCCAGAAGCTCGGTGAGGTTGTGACCGTCGCCAAGGCTGTTTCCGGCGCTGACGTC
AAGGCTGACCTCGAGGCCAACGCCGCCTCTATCAAGGCCCGAGCCGAGTCTCCCATCACC
TTCAACAAGGAGGTTCGAGACCGACAGGCCCAGATCAACGAGGAGTGGAAGAACCGAAAG
TCCGCCTTCCCCCAGCGACTCGAGGCCCAGAAGAAGCACCTCAACCTGCCTCTCTTCCCT
TCCACCACCATTGGTTCTTTCCCTCAGACCAAGGATATCCGAATCAACCGAAACAAGTTC
ACCAAGGGCGAGATCACCGCCGAGGAGTACGAGAAGTTCATTGAGAAGGAGATCCAGGAT
GTTGTCAAGTTCCAGGACGAGGTTGGACTCGATGTGTACGTCCACGGTGAGCCCGAGCGA
AACGATATGGTCCAGTACTTTGGTGAGCGACTTAACGGTTACGTTTTCACCCAGAACGGA
TGGGTCCAGTCTTACGGCTCTCGATACGTTCGACCCCCTATCATTGTCGGTGATATCTCT
CGAGCCCGACCCATGTCCGTCAAGGAGTCTCAGTACGCCCAGAGCATCACTAAGAAGCCT
ATGAAGGGTATGCTTACCGGTCCCGTCACCTGTCTGAGATGGTCTTTCCCCCGAGACGAC
ATTTCCGACAAGGACCAGTCCGAGCAGCTTGCTCTTGCCCTCCGAGACGAGGTTCTTGAT
CTCGAGAAGGCCGGCGTTTACGTAATCCAGGTCGACGAGCCTGCTATCCGAGAGGGTTTC
CCTCTCCGAGACGGCCCTGCCCGAGACGACTACCTTAAGTGGGCCGTTGATTCTTTCCGA
ATCTCTACTGCCGGCGTCGAGGACTCTACCCAGATCCACTCTCACTTCTGCTACTCTGAC
TTCAACCCCTCCACCATCGTCTCTCTCGATGCTGATGTTGTTTCCATTGAGTTCTCCAAG
AAGAACGAGCCCCAGTACCTCAAGGACTTTGCTTCTTACCCCAACCAGATTGGTCTTGGT
CTCTTTGATATCCACTCTCCTCGAGTTCCTCCTCAGGAGGAGTTTGAGCAGCGAATCGAG
GAGATTCTCAAGTTCATCCCCAAGGAGAAGGTCTGGATCAACCCCGACTGTGGTATGAAG
ACCCGAAAGTGGGAGGAGACCAAGAAGCAGCTCACCAACATGGTCAAGGCCATTGAGAAG
TTCCGAAACTAAGCGGAATCCTACTGCGTTTAAAAACTGTATATTTCAGATGTCAACCAT
CTGTTTTATTTATTAGTGATGTCAACCGTCACCATAACTTATTCAACATATAATGTAAAT
ACATCAACTGATTGTAACACACGCACTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E12683g_CDS-001

Protein length: 757 aa.
Product: Homocysteine methyltransferase
Gene: MET6

>YALI0E12683g_CDS-001 MVLSSVLGFPRIGANRELKKITESYWGQKASVDELFKVGKELREINWKKQKDAGVDIIPS
NDFSFYDHILDHSQLFNVIPERYAKYNLAPIDTVFAMGRGLQRDNVDVPALEMVKWFDSN
YHYVRPTFTNATEFKLNGQKPVDEYLEAKALGIETRPVLIGPVSFLALGKADTDSLDLEP
ITLLEKLLPVYTEILQKLHAAGAKTVQIDEPVLVLDLNEKVQAAFKTAYDYLAKQKDIPE
ITIATYFGDVRPNLKAIEGLPVAGFHFDFVRVPEQLEDAIKLVGDDKTLSVGVINGRNIW
KTDFAKAIKVVEQAKEKLGDRVVVATSSSLLHTPVDLANEHKLDPSIKDWFAFATQKLGE
VVTVAKAVSGADVKADLEANAASIKARAESPITFNKEVRDRQAQINEEWKNRKSAFPQRL
EAQKKHLNLPLFPSTTIGSFPQTKDIRINRNKFTKGEITAEEYEKFIEKEIQDVVKFQDE
VGLDVYVHGEPERNDMVQYFGERLNGYVFTQNGWVQSYGSRYVRPPIIVGDISRARPMSV
KESQYAQSITKKPMKGMLTGPVTCLRWSFPRDDISDKDQSEQLALALRDEVLDLEKAGVY
VIQVDEPAIREGFPLRDGPARDDYLKWAVDSFRISTAGVEDSTQIHSHFCYSDFNPSTIV
SLDADVVSIEFSKKNEPQYLKDFASYPNQIGLGLFDIHSPRVPPQEEFEQRIEEILKFIP
KEKVWINPDCGMKTRKWEETKKQLTNMVKAIEKFRN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG