YALI0E12507g

Overview

Description similar to uniprot|Q873I9 Neurospora crassa B9B11.100 related to pirin
Locus type CDS
Locus tag YALI0E12507g

Location

Species Yarrowia lipolytica Positions 1523978..1524907
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 930 (nuc.)
Previous locus YALI0E12485g Next locus YALI0E12529g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E12507g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E12507gYALI0E12507g_mRNA-001YALI0E12507g_CDS-001

Nucleotide sequence

 

>YALI0E12507g
ATGACTACTACTACCACTACTACTACCGCTACTACTGCTATGGCCAAGGCCATCGATAAG
GTCTTCACAGCTCCCGAACAGTCTGAAGGAGTTGGGGCCCGAGTCAGACGAGCCATCGGT
ACTCCAAAGCTACGAAACTTCAACCCTTTTATTATGTTTGACCACTTCAAGGTCCCTTCA
ACAGCAGGATTCCCTGATCATCCCCATAGAGGTCAGGAGACTATCACCTATGTGATTGAT
GGAGCTGTTGACCACGAGGACTTTACTGGAAGCAAGGGTACTTTGAATGCTGGAGATCTG
CAATTTATGACTGCAGGTAAAGGAATTGTTCACGCAGAGATGCCTGCAGCTGGTCCAAAC
GGTGAGGTGCAGGTCGTGGAAGGAATCCAACTGTGGGTTGATCTTCCTGACCACCTCAAG
AACTGCGAGCCCCGATACCGAGATCTGAAGGCCGCAGAGATCCCTACTGCTCAGTCCGAC
AAGAAGGATCTTACTGTCAAGGTAATCTCAGGCCAGGCTATGGGCGTGGACTCTGTCAAG
GATCTTGCTTACACTCCTGTCTGGTACCTTGACTACTTCACCGAATCCAACTACGACGGA
ACAGAAATGAGCCAGACCATGCCTGCTGGATTCAACTCTCTGCTGTACGTTATGAAGGGC
TCTGCTATTGTTGATGGCAAGGTCATAAATGCTCACGATGTTGCTACTCTGTCTACCAAG
GGTGAGACTATCGACTTTACCCCTGCTCCCAACTCTCGAATCATCATTATTGGAGCTCAG
ATTCTTAACCAGAAGACTGTCCAACACGGTCCTTTCGTGGCTTCTTCCGAGGAAGGAATC
ATGAATGCCTTCATGGACTATCAGTTCAGCAGCAACGGCTTCGAGCGAGCTGCTACCTGG
GAGTCAGAAATCGGTAAGAGAATGATGTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E12507g_CDS-001

Protein length: 310 aa.
Product: Pirin, putative

>YALI0E12507g_CDS-001 MTTTTTTTTATTAMAKAIDKVFTAPEQSEGVGARVRRAIGTPKLRNFNPFIMFDHFKVPS
TAGFPDHPHRGQETITYVIDGAVDHEDFTGSKGTLNAGDLQFMTAGKGIVHAEMPAAGPN
GEVQVVEGIQLWVDLPDHLKNCEPRYRDLKAAEIPTAQSDKKDLTVKVISGQAMGVDSVK
DLAYTPVWYLDYFTESNYDGTEMSQTMPAGFNSLLYVMKGSAIVDGKVINAHDVATLSTK
GETIDFTPAPNSRIIIIGAQILNQKTVQHGPFVASSEEGIMNAFMDYQFSSNGFERAATW
ESEIGKRMM*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG