YALI0E12485g

Overview

Description similar to uniprot|P53729 Saccharomyces cerevisiae YNR029c
Locus type CDS
Locus tag YALI0E12485g

Location

Species Yarrowia lipolytica Positions 1522587..1523875
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1289 (nuc.)
Previous locus YALI0E12463g Next locus YALI0E12507g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E12485g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E12485gYALI0E12485g_mRNA-001YALI0E12485g_CDS-001

Nucleotide sequence

 

>YALI0E12485g
ATGGCTTCGACGGACGAAAAGAAGGTCGCTAAGACCATTAACGACACAAAGACAGACGCA
ACTGTCCCCACAACAAGAGCTGACGAAGACGACGACGAAATCCCAATGCTTGTTTCGGGA
CCTCCTCCTACTGGCATGTTCCAGACCCAGAGTGAACACCACTACAGCACATTCGACGTG
CCCCAGGTCGAAGACCGTGTGCCCATCACCATCATCACCGGCTATCTGGGCTCAGGCAAA
AGTACACTGCTCAATTTCCTCAGCAAACAGAAGGAAAAGAAGATCGCCATCATTCTGAAC
GAGTTTGGAGACTCGGCCGAGGTGGAGAGATCCCTTACTGTCACTCAAGACGGTCAGATC
TTTGAGGAATGGCTCGAGCTCGACAACGGCTGTCTGTGTTGCACAGTCAAAGATTCGGGG
GTGGCGGCCATCGAGAACCTCATGACCAAGAAGGGCAACTTTGATCTCATCATGCTGGAG
ACCACCGGAGTTGCGGATCCAGGCCCTATTGCTAACATGTTCTGGCTGGACTCTGCGCTT
GCATCTTCCATCTACCTCGACGGAATTGTGACTGTGCTGGACGCAACCAACATCGTAAAG
TGTCTGGATGACGTGACTGTCGACGATGCACATCATGGGGAGAACAAGGAGCTTCAACCG
CTATCGACAGCCTGCATCCAGATCGCCCACGCCGACATTCTTATTCTAAACAAGGTCGAC
AAGATTGGCTCTGCCGAAGAGCTCGAATATATCAAGAACAGAATCAAAGGTATCAACGGC
CTGGCACCGATCATCGAGACCACCTATGGACAGATTGAGCTGCCGAAAATCCTCAACCTC
AAGGCCTACGAAGAAAAAGTGAACCTTGAGCACGCACATTCTCACGATCACGGATGGCAT
GACCACAGAATCACCACTGTTTCCGTTGGTTTTCCTCCTGTTTCGCTGCAGCAGGCTGAA
CAGCTCGAGAGCTATATCCAGCAGGCCACCTGGGACAACCAGTTATTGGGAGTGCCCGTC
GAGATCCACAGAACAAAGGGTAAGCTGGTAGACACCAACGGAAACGTCCGAGTGATCCAG
GGTGTTCGAGATACTTATGATGTTATGGATACCAGTCAGGTGGAGAATCTGTCAGAAGTT
GGACATAAGCATCCTTCCAAGCTCGTCTTCATTGGAAAGAACCTCAGTAAGCAGCTCGTT
CTCGAGAGCTTTGCCCGTTTCATGGGCATTACAGATATTATTTAAACAGCAACCTTCAAA
TACAATCTATTACATTAGATAAAGAGTCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E12485g_CDS-001

Protein length: 415 aa.
Product: Conserved hypothetical protein

>YALI0E12485g_CDS-001 MASTDEKKVAKTINDTKTDATVPTTRADEDDDEIPMLVSGPPPTGMFQTQSEHHYSTFDV
PQVEDRVPITIITGYLGSGKSTLLNFLSKQKEKKIAIILNEFGDSAEVERSLTVTQDGQI
FEEWLELDNGCLCCTVKDSGVAAIENLMTKKGNFDLIMLETTGVADPGPIANMFWLDSAL
ASSIYLDGIVTVLDATNIVKCLDDVTVDDAHHGENKELQPLSTACIQIAHADILILNKVD
KIGSAEELEYIKNRIKGINGLAPIIETTYGQIELPKILNLKAYEEKVNLEHAHSHDHGWH
DHRITTVSVGFPPVSLQQAEQLESYIQQATWDNQLLGVPVEIHRTKGKLVDTNGNVRVIQ
GVRDTYDVMDTSQVENLSEVGHKHPSKLVFIGKNLSKQLVLESFARFMGITDII*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG