YALI0E12419g - AAL4

Overview

Description uniprot|Q6C650 Yarrowia lipolytica YALI0E12419g AAL4 Acyl/aryl-CoA ligase, putative
Locus type CDS
Gene name AAL4
Locus tag YALI0E12419g

Location

Species Yarrowia lipolytica Positions 1513606..1515510
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1905 (nuc.)
Previous locus YALI0E12408r Next locus YALI0E12441g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E12419g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E12419gYALI0E12419g_mRNA-001YALI0E12419g_CDS-001

Nucleotide sequence

 

>YALI0E12419g
ATGACACAGATTATCCATAACGCCACCATCCCCAATATCCCCGTGGACCAGCTCTACGAC
GGCAAGATCACCGACTTCATTCGAAGCGGAGGCCACTCCAACGAAACCAAGCCTTCGGTG
ATCGATGCCAAAACAGGCCAGACTCTTTCCCAGGCGGAAATGTGGCAGCTGTCGGACAAG
TACGCGGCACTTCTAAGCTCGCAGTACGGTCTATGCAGACACAGAGACAACGAGCTGGAC
CCATCCATGGGAGATGTGCTCATCACCTTTTTTGGAAACGTGATCCTCGCCCCTGTGGTC
CATTGGGCTGCTCTCGACCTCGGAGCAACCATTTCTCCCGGATCCACAGGCTACTCGGCC
CAGGATCTCGCTCACCAGTTCAGAGTCACCACTCCCAAGGTCGTTGTGTATGCCAAGGCG
TTCAAGGATGTGGTGGACGAGGCTACGAAGCTGTACAACTCGCCCAACCCCCCCGCACTT
GTTGAGCTCGAGGCGCTGGACAAACAGGCCCGAATGGTTGGAAACCACAAGGTCGAACAC
ACCCGAAAGATCAAGCTGGCCCCCCACGAGTCGCGAACTCGAATCGCGTACCTTGGCATG
TCTTCAGGTACCTCCGGAGGAGTTTCAAAGGCTGTCAGGCTCACCCATTCCAATCTCACG
TCGTGTTCTGAAATCTCTAACAAAGCCTCCGAGTCCCTCGCAACTGACCAGCAGATCGCT
GCCGCCATTATCCCCGTGTCTCATCTGTTTGGACTGTCGAAATTCCTCATTGGCAACCCC
CACGCCGGAGCCACCACTGTCTATCACAATGGGTTCGATCTGATCGAGGTGCTGGAGGCA
CAGAAGAAGTATAAAGTCAACTCGTGGACCCTGGTACCCCCCATCATTGTACTGCTCACC
AAACACCCCATTGTCGAGAAGTACATTCCTTCTCTCAGGGCCCACATGCGAGCCATCCTC
TCGGGAGCTGCTCCTCTGGGTGCCAATGTCACAGAGGCTCTTTTGACCAGAGTCACTGGC
AACAAGTTTGGCGAGTCCCCCGAGGGCGGTCTGCGAATCGTCCAGGGCTACGGACTTACA
GAGACGTCTCCCGTAGCCACTCTGTTTGACCCCGAAGACAAGGAACGACACATTAGGTCG
TGTGGAAAGCTCGTGCCCAACTCGCAGGTTCGAATTGTGAACGAAGACGGCGTTGATCAG
CCCGCCTACGATGTGGACCCCAACGAGCTGGACGAGGCCATCAAACAGGGCACTCTGCCA
GTCGGAGAGCTTTGGATCAGAGGTCCCCAGGTTATGGACGGCTACCATAACAACCCCGAG
GCCAACGAAGCCTGTTTCGTCAAGGCTGACGATGCTGAAGCAGATACTGCCTACTATAAC
AGACACTGGTTCCGAACCGGAGACGTTGCTCTGGTCGACAAGCAGGGCAGATACATGATT
GTGGACCGAACCAAGGAGATGATCAAGAGTCAGGGTAAGCAGGTTGCTCCTGCCGAGCTC
GAAGACATGCTCCTGGGACACGCACAGGTGGCAGATACCGCAGTCATTGGTATTCAGGAC
GTGGAGAAGGGTAACGAGGCTCCCCGAGCTTTTGTTGTGCTCAAGGACCCGAAGTACGAC
GCTGTGGAGATTAAAACATGGCTGGACAAGCAGCTTCCCAAGTACAAGCAGCTTCATGCT
GGCATCGTGGTGATTGATGCCATTCCCAAGAACGCCAGTGGCAAGATTCTGCGACGATTG
TTGCGTGCTAGAAAGGACGATGTTGTTCTGGGTCTCAACAAGGCCAAGCTGTAAGACGAG
ATCCGAGGATGTACTCCGATGGTCTACCAACAAGAGGCGTGTAAGTTGCAACATTTGTGT
CATGGATACATGTATAATAATATATTTTGGATGAGCAACAGTTGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E12419g_CDS-001

Protein length: 598 aa.
Product: Acyl/aryl-CoA ligase, putative
Gene: AAL4

>YALI0E12419g_CDS-001 MTQIIHNATIPNIPVDQLYDGKITDFIRSGGHSNETKPSVIDAKTGQTLSQAEMWQLSDK
YAALLSSQYGLCRHRDNELDPSMGDVLITFFGNVILAPVVHWAALDLGATISPGSTGYSA
QDLAHQFRVTTPKVVVYAKAFKDVVDEATKLYNSPNPPALVELEALDKQARMVGNHKVEH
TRKIKLAPHESRTRIAYLGMSSGTSGGVSKAVRLTHSNLTSCSEISNKASESLATDQQIA
AAIIPVSHLFGLSKFLIGNPHAGATTVYHNGFDLIEVLEAQKKYKVNSWTLVPPIIVLLT
KHPIVEKYIPSLRAHMRAILSGAAPLGANVTEALLTRVTGNKFGESPEGGLRIVQGYGLT
ETSPVATLFDPEDKERHIRSCGKLVPNSQVRIVNEDGVDQPAYDVDPNELDEAIKQGTLP
VGELWIRGPQVMDGYHNNPEANEACFVKADDAEADTAYYNRHWFRTGDVALVDKQGRYMI
VDRTKEMIKSQGKQVAPAELEDMLLGHAQVADTAVIGIQDVEKGNEAPRAFVVLKDPKYD
AVEIKTWLDKQLPKYKQLHAGIVVIDAIPKNASGKILRRLLRARKDDVVLGLNKAKL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG