YALI0E12081g

Overview

Description similar to uniprot|P28263 Saccharomyces cerevisiae YEL012w UBC8 E2 ubiquitin-conjugating enzyme
Locus type CDS
Locus tag YALI0E12081g

Location

Species Yarrowia lipolytica Positions 1465966..1467608
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1643 (nuc.)
Previous locus YALI0E12067g Next locus YALI0E12089g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E12081g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E12081gYALI0E12081g_mRNA-001YALI0E12081g_CDS-001

Nucleotide sequence

 

>YALI0E12081g
GCAACTGATAACCCCATTATCCCACATAACCACACACATATATCGACAATCATGAGGTGA
GTAGAAAAGGGACGGAGAGGAGGAGACGGAGACGGGGGAAGAGCATCTCAGGGCCCCAAA
GAAGCACAAAAAACACAGCCTCGGACCTCCACGACGCCAGGTGGCGGGTCCCCCCTCACT
CAGTTAGATAGCACCACTAGGGGAGTGGTACTACAGCAGACGCAGACAGACGGGAGAGGG
ACCAGGGGCGAAGACGGACGGAGTGATATGAAAAAGACATGTAGGTGAAGGCTTGGGAGT
CTCAAAACACATCCCAGTCTGCATCGCAAACTGGACTGGTCCGACTACCTCCGGTTATTG
CTTGGATGTGGCCACCCCCAATAAAATGCGGGGTCCAGACTGGATAGGGTGACTGGGAAG
GTGACAACAGCACTTGATCGAGGAAAAGGTCGAGAGAAAGGGTCTCCCAAAGCGCCGTAG
GGCGTCGTCTGAGCCAGATACGATACCACATCGATGGCCTACTTTGGAATGTGATTCTGC
TCTGTAACTCACACTCCGCTTGGACCCCACACCTCTGCCTAAACCTGTCTGGTCTGCCTG
AATGTGCCTCTACTGATGGGTTGACGGAACTTATGGACTCAGCGACGCTATCCGGAGCTA
TCAGTGACATGTCTGTTGCTTGGATTTGAAGCCCCATCTTTTTCGGGCAGGTTATCCCCG
AATATCTCCCTGAAATTGCTTATGCTCATGTGCTCAGTGACTAGAGAGCTGGTGTTGGGC
TGCTGCCATACTGACCCCATTGGTTCGCATATCTCCACCCTCATTACAACCTCACCACCA
CTCTCATACACAAACTAACACAGTTCCCCAACAAGAAGAAGAATCGAGACTGACGTCATG
AAGTTGTGAGTATCTTTCCAGCGACACCCCGCCTCCACCACTAACACAGGCTAATGAGCG
ACTACGAAGTGACGCTGGTCAATGATAGCATGCAGGAGTTTTACGTGCGGTTTGAAGGAC
CGGAAGAAACACCGTTCCAGGGAGGAATATGGAAGATCCACGTGGAACTGCCAAACGAGT
ACCCATACAAGTCGCCCTCCATCGGCTTTGTCAACAAGATCTTCCACCCAAATATCGACG
AGCTCAGCGGGAGCGTGTGCCTCGATGTCATCAACCAGACGTGGTCCCCCATGTTTGACA
TGGTCAACATCTTTGAGGTCTTCCTGCCTCAGCTGCTGCGATATCCGAATCCCAGCGATC
CTCTCAACGGAGAGGCCTCGGGTATGCTGATGCGAGAGCCCAAGCAGTACGAGGAGAAGG
TCAAGGACTACGTGACCAAGTACGCCAGCAACGACTCTGTGTCGGCAGAGAAGGACATTT
CTGACGATGACGATCTCAGCAGCATTGGCTCGTTTTCTGACGACGACGAGGAGCCCGCCG
GAGAGTTGGAAGTCTAGTGCATATTTATATAACATTAAGAGTGCGACTGAGAGTCGTTTA
CTGTCTACGAGCAGAGGCTACAGTAGGCTGTTTAGGTTGATTGGTGACTTACTGGCGGAT
GATTTCGATTCTAGAAGAGCAGCAGTTGTGCTAGAGCTGTCTCAGTGGCTGATTTTGTAA
TGATTACATGTTCTGATTTAGAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E12081g_CDS-001

Protein length: 185 aa.
Product: Ubiquitin-conjugating enzyme that regulates gluconeogenesis, putative

>YALI0E12081g_CDS-001 MSSPTRRRIETDVMKLLMSDYEVTLVNDSMQEFYVRFEGPEETPFQGGIWKIHVELPNEY
PYKSPSIGFVNKIFHPNIDELSGSVCLDVINQTWSPMFDMVNIFEVFLPQLLRYPNPSDP
LNGEASGMLMREPKQYEEKVKDYVTKYASNDSVSAEKDISDDDDLSSIGSFSDDDEEPAG
ELEV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG