YALI0E11957g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0E11957g

Location

Species Yarrowia lipolytica Positions 1449055..1450588
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1534 (nuc.)
Previous locus YALI0E11935g Next locus YALI0E11979g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E11957g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E11957gYALI0E11957g_mRNA-001YALI0E11957g_CDS-001

Nucleotide sequence

 

>YALI0E11957g
ATGGACGAGATACTGAAAAAACAGGGGTTCCCGGACATGGGAGAGATCACCATGGAACAG
GTGTGGGACGTGTTCAACCAGCTCAACCCGATGGAAAAACGATCGCTTTCATCGGCTCTG
GAGGTGCTGGTGGAGCACTCCAACGGCAAGATTGAAGAAATGGATGAGACGATACAGTCA
GGCGATGAGGAGGGCGAGTTGACGCAGCAGGAGATGGAGGAACTCACCAACTCGATCAAG
GCGAGCGGAAATGACGTTCCGGATCTTATGGGTCCAGATCGCAACTCCAGCATGCATTCT
GCCTCGGATGGAGAGGCTATTCTTGGCAAGACGATAATTATCCACGAAGACCAGCTGGAG
AAGACCTTTTCAATGGTCAAGCTCGACAACGACGAGGCGCCGTTTCCCGCAGATCCCAAC
AAGCTACACATTCCCTTCACATCCGAGCAGTTGAGTGAGACGTCCAACCTCATGAAGTGG
GTAGGAGCTACAGATATGCGTACTTTTATCTGGGAGTACGAGGCGATCATCCGAGCGATA
TTTGCTGCATGGAACGGAGATCATGATGTGGAGAACCTGGAGTTTTATCTTGTTTATTAC
CTCCCATTCTTTGTGTCTCTAGGAGTCATCTACAGTCTGGAAGCCGAGTTTGGATACAGA
ACGTTTGAGGTGGAAGGCCTAGACAAGCTGGAGATTGAGGATGACGCCAAGGAAATGCAC
CAACGGGTGTTGGCAGGCTCGTGGCGCGAAATCAGACGGTTTGTGGTCAGCGAGTTTGCT
GCCATCAAGGACGACGAGGAGTTCGTTTCTCACACAATGTCGTTGCTTGAAAACGTGGCA
GTTTCGAAACGGGGTGGACTCAAGCGGTATCTTTCGTACGTGGCTCGTCTTGTCAGCAGA
GCCCAATCTGAGCGAGAAATCAACAAGTGTCTTTACGGGGAAGCTGGCACTGGAGGATTC
ATTGATATCCAGGACGTGTACAATGTGGTTGTGATGCGACTGCCGTTCAAGTGGCGCTTG
GAGGCTGAGAATCTCGGCAACAAGGCTACTTCGGCCGTGGAGTTTGCTACTATTTTGGAA
CACACGTTCAGCAAGGATCAAGACTTCAATGCCCGCAATGAAGAGCTCATGGGAGGGTCT
CTGTTTGAAAAGAACAGAAAGAAGACGAAAACGAACAAGAAGGAAAAGGAAAAGGAAAAG
GAAAAGGAAAAGGAAAAGGAAAAGGAAAAGGAAAAGGAAAAGGAAAAGGAGACTGACGGT
GTCAAAAAGACGAGTGTCAAGGGACCCCTGAACGCAGAAACACTGGCACAAAATAACTCA
AAGGAGGTACTCGAAGAAAAACTGAGAGTGCTCATTACAGCGTTAACCAAGGAGTTTGGA
CCTTCTTCAAAGGAGTGGGCTTGCGTTCAAGATATGAAGCTACATGTTCCCGATAAGGCT
CCTTCTGCCCCTCCTCCCAAGAAACATGATCCTCTCGAGAGTCTCAGAGGCAATAATTAT
TTCTAGTATGTACAATACGATATTTATTTATAAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E11957g_CDS-001

Protein length: 502 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0E11957g_CDS-001 MDEILKKQGFPDMGEITMEQVWDVFNQLNPMEKRSLSSALEVLVEHSNGKIEEMDETIQS
GDEEGELTQQEMEELTNSIKASGNDVPDLMGPDRNSSMHSASDGEAILGKTIIIHEDQLE
KTFSMVKLDNDEAPFPADPNKLHIPFTSEQLSETSNLMKWVGATDMRTFIWEYEAIIRAI
FAAWNGDHDVENLEFYLVYYLPFFVSLGVIYSLEAEFGYRTFEVEGLDKLEIEDDAKEMH
QRVLAGSWREIRRFVVSEFAAIKDDEEFVSHTMSLLENVAVSKRGGLKRYLSYVARLVSR
AQSEREINKCLYGEAGTGGFIDIQDVYNVVVMRLPFKWRLEAENLGNKATSAVEFATILE
HTFSKDQDFNARNEELMGGSLFEKNRKKTKTNKKEKEKEKEKEKEKEKEKEKEKEKETDG
VKKTSVKGPLNAETLAQNNSKEVLEEKLRVLITALTKEFGPSSKEWACVQDMKLHVPDKA
PSAPPPKKHDPLESLRGNNYF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG