YALI0E11935g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0E11935g

Location

Species Yarrowia lipolytica Positions 1447865..1448908
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1044 (nuc.)
Previous locus YALI0E11913g Next locus YALI0E11957g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E11935g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E11935gYALI0E11935g_mRNA-001YALI0E11935g_CDS-001

Nucleotide sequence

 

>YALI0E11935g
ATGTCACGAAAGGCAGCTTTGGCACGATGTGTACAAAAAAGCTACGAGTGGGAAACACGC
ACGGACACGACGTTGAGTGGCGTATTCGGGTCTGAAGGACAGGAGCTGGACGAGTTTCTC
GACACTGTTCCCGACGAGTATCATTCAGAGAGGACCCGGCCATTGCTGCAAAAGCTGACT
CGCCAATGTGAAGCTCTCAAAACGGCTAAGCCGATGCCGAAAAAGCATGGCGATGACTTT
GGGTTCTCGGACGAAGAGGAAGATGAGGGGGGGTCAGCCGAGGCGACGCCCTTGAGGGAA
GACGACCCTTTGACCGCTCTCCAGAAACGTTATGTGGGTCTCGAAAAGGCACTGAGGCAT
ATTGAAGGCATTGACAAGGAAGATGTTGGTACATTGTCGTTTCTGTTTGCCGGCAAGGCC
GTGGAAGACAGCATTAACAACAACATTTCGCTGGAAAATGCGCTTGAGAAGGAGGCCAAA
CAACTTAGGAAAAGCATCCGTGCTGAAAGGAATCTCAAACAGGAACATAAAAAACTGACA
GAAATGCTTCAGGCCAAGTTGAGGGAGACGCGTGAAAGAAGTCGCAAAGGCCCCAACTAC
GAGAAGGAGCTTCTTCAGGCTCAGTTGAAAGAACAGAGTCAGTTGTCAGGAAACGATATC
TCCAGTGGTCTGAGGTTCATCAAGGGAACATTGGCACGTCTCATTGCCGACTCGTATCTC
AAGAAGAGTACGAAAATCACGGAGGGCGAGTACGAGGATCTGGTAGACATTTACGGAGAC
AGAATCAAGATGCTGATCGATGATCTGTTTTACGCTAATCTGGTGGCAGATGAAGAGTCG
CTGGCTCCAGACGACGAGAAACGGTACATTGAGTATCACAAGGAGGACATTCCTATCGTT
CAATTCTTTCTGACGTCGAATTTTGTGGTTCCGTACCCCAAAGACGGATTCAAAATCAAG
CTGAAGATGCAGCTGGAGTTGTAAACATAGCAGTATTTATATTAACGTATTTAATGAACT
ACCCGGAGGGTATATACATGTGTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E11935g_CDS-001

Protein length: 328 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0E11935g_CDS-001 MSRKAALARCVQKSYEWETRTDTTLSGVFGSEGQELDEFLDTVPDEYHSERTRPLLQKLT
RQCEALKTAKPMPKKHGDDFGFSDEEEDEGGSAEATPLREDDPLTALQKRYVGLEKALRH
IEGIDKEDVGTLSFLFAGKAVEDSINNNISLENALEKEAKQLRKSIRAERNLKQEHKKLT
EMLQAKLRETRERSRKGPNYEKELLQAQLKEQSQLSGNDISSGLRFIKGTLARLIADSYL
KKSTKITEGEYEDLVDIYGDRIKMLIDDLFYANLVADEESLAPDDEKRYIEYHKEDIPIV
QFFLTSNFVVPYPKDGFKIKLKMQLEL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG