YALI0E11869g

Overview

Description similar to uniprot|P13382 Saccharomyces cerevisiae YNL102w CDC17 DNA-directed DNA polymerase alpha, 180 KD subunit
Locus type CDS
Locus tag YALI0E11869g

Location

Species Yarrowia lipolytica Positions 1440035..1444207
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 4173 (nuc.)
Previous locus YALI0E11847g Next locus YALI0E11891g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E11869g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E11869gYALI0E11869g_mRNA-001YALI0E11869g_CDS-001

Nucleotide sequence

 

>YALI0E11869g
ATGTCGCGACGAAACGCTCTGGCGGCCCTCAAGGCGGCTCGAGCCGGTGAGAAGCGAGAA
CTCACCTTCAACGCCGAAGACGTGTACGACGAGCTCGACGAAACCGAGTTCAAGCAGCAC
CGAAAACAAGAGCTGCTCCAGGACGACTTTGTGGTGGGAGATAACGGAGAGGGGTACGCA
GACACGGGCGCGTACGAGTGGGAGGATACGGGCAAGCGGTACGGCTCCAGCGACGAGGAC
GGCTCGCCCAAGAGCAAGCGGGCCAAGAAAAACAGCGACGTGATCAAGAACCGCAAGCTC
AACTTCAAGGCGCTGGCGTCCAAGCCTGTCAAGACGGAGACGGCGGCGTCAGCAGTGGCA
GACGACTTCATGGACGACTTGATTGGCGTGATTGGCGGCTCCGGGCCCAAAAGCGCCGAC
AAGAAGAAACCCATGAACCGCAAGTCGCGATCCGCCCGGGCCAAGGAGGAGGAAGACGTG
TTTGTGGACATGGACTACAGCTACGACATGGCCAGTCCGGAGCACGTTTCGTCTTCTCCC
CCCGCGGAGATTGTGCATGCTGTCAGAGAAGAGGCCATTGCTGACGGCATGGATTTTGCT
GATGACATGGACATTGATATGGGCGAGCCCGACATTCCTAACAAAGTGCCTCAATCGGAG
TCAGACGACGATGAGGACGAGGTTGTGGTTCGACCCAAGGCCGGCCAGGCTGCAGCTGCA
GTCAACATGCGCGGCCAGAAGCCGGTGGTTGCAGTCAAGAAGGAGATTGTCAAGACGGAG
CCAGTCAAGAAGGAGCTGGTAAAGGAGGACATCGAAGAGCCCGAACTGGTTCCCGATATC
ACCAGTAACATCCAGCTTGCGACTTCAAAGGCTGGATCTGCTGATACTGCCAAGATCTCT
GTGGAGCCCAACGAGGTGACCACCGAGGACGGCAAGTTCAAGTTCTTCTGGATGGAACAC
GCCATTGTGCGAGACACACTCTATCTGTTTGGAAAGACCATGGTGCTGACCGGCAAGAAC
AAGGGCCAGTTTGTATCGTGTCTCATCAAGGTTGCAAGCACCCAACGACAGATGTTTGTG
CTGCCCAAAAACGAGTGTAGCACTTCTGACGTGCACGAGGAGCTCGATGGAATTATGGAG
GCCCGAGGTATTCGAATGCGAGCCAAGCCTGTCACTAAAAAGTACTGTTTCCATCTGCCT
GGTGTCCCTGCCGAGGCCGAGTACCTGGAGGTGCTGTACTCCCCTCCCAAGGAGAAGTTC
GACGTTCCTTCTTCTGGAGCTACCTTCTCCCACGTGTTTGGAGCCAATCAGTCGCTGTTT
GAGCAGTTTGTGCTCTCTCATCAGGTCATGGGTCCATGCTGGATGCAGATTGATGAGCCT
GACTTCGCCTCGGCTGGTCAGGGACGTATTTCGCACACCGGAATCGAGATCACCGCTAAG
TCGTCGGCCAAGATTTCTGTCTGTTCCAACCAGGAAGCTCCCATGCCTCCAATTTCGATG
ATCTCTCTGGCTGTGCGAACCATGACCGAGGGCAAGTCTCAGTCTGTGGTAGCCGTGACT
CTCCGAATGTTCCAGGACATGCCTCACGATACCACATCCAAGCTCGGCGAGCTGCAGCAC
CGATCTATGACCTTCTTCCGGTACCCCAGTAAGGTTGCACCTGTTGGCTTCAAGCAGATT
CTGCAGGAACACAATGCTGGCACTGCTGTGGACAAGATCATTCCATGCAATTCTGAACTG
GACATTTTGAGCCATATGGTGCGGCTTATTGCGCGTGTTGACCCCGATCTCATCTGCGGC
CATCGTCTGGAAGCTCTGCATCTGGATGTTCTGCTGCACCGACTCAAGGAGCTCAATGTC
AAGGACTGGTCTTCCATGGGCCGACTTCGACGAACACAATGGCCCCACATGAACTACGGA
GTTCTTGACGGCCGGCTTATTCTCGATATGGACAACTCTTACGGTCGGTCTGTGGTGCAA
GGATGTCAGTCGTTCGATCTGACTGAAATGTCGCTCAACACTCTGGGCATCAAGCGGATG
GACATTGAGCTAGATGCTGCTCATAGCAAGATGGTCAGCTCTGCCCGGCCTTTGCTTAGC
TATCTCATGCACTGCATCCAGGACACGGGCCTTGTTGCCGGCATTGTGATCCAGACCCAG
GCCATTCCTCTGTCCAAGCAGCTCACCAACCTGGCCGGAAACGCCTGGAACAAGACTCTG
GCTGGTACCCGATCTGGCCGAAACGAGTCCATTCTCTTGCACGAGTTCACTCGTCAGGGC
TACATTATTCCCGACAAGGAAGCCGGTCGAGGCACCAACAAGCGAGGCAAGGCCAAATTC
CAGGGAGGTCTGGTTCTGGACCCCGTTAAGGGCCTGTACGACCGCCACGTGCTCGTCATG
GACTTCAACTCACTGTACCCTTCCATTATTCAGGAGTACAACATTTGCTTCTCGACTGTG
GACTGGGCGTCTATCCCCGACGACCAGATTGAGCCTCCTGCTCAGCCCGAACCCTCCGTG
GAGCAGGGCATTCTCCCTCGACTCATTAGGACTCTTGTGCAGCGAAGACGGGAGGTCAAG
CGACTCATCAAGGACCCCAAGGCGTCTGCTGCCCAGAAGAAGCAGTGGGACGTGAAGCAG
ATGGCGCTCAAGCTGACTGCCAACTCCATGTACGGTTGTCTGGGTTTTGAGGGCTCTCGT
TTCTACGCCAAGCCTCTGGCCAACCTCACCACCTCCATCGGTCGAGACACTCTTCGAGCC
ACCAAGGAGCTTGCCGAGGCCGAGTCCCTGCAGGTTGTCTACGGTGACACTGATTCTGTC
ATGATCAACACCAACACAGACACCTACAAGGACGCCATCAAGGTTGGTAACGACTTCAAG
AAGAAGGTCAACGGTCTTTACAAGCAGCTTGAGATTGATATCGACGGTGTTTTTGCTCGT
CTTCTGCTCACCAACAAGAAGAAGTACGCTGCTCGTCTGGCTACTGAGGAGGGCATGGGA
AAGATTGAGGTCAAGGGTCTGGATCTGAGACGACGAGAGACGTGCCAGATTTCCAAGGAC
GCTTGTACCTATGTGTTGGAGCAAGTTCTGGGTCCCGACGACCAGGAGACTGCGCTGAAC
AATGTCCACGAATACCTTTTTGAGCTGGCTGAGAAGCTACGATCTGGGCCCGTCAAGGAC
GAGTCAGCTCCTTTCCCCGTGGAGCACTATGCGATTCTCAAGCAGCTCGGAAAGGACCCT
AAGGCCTACAACCCTCCCATCCAGCCTTTTGTGGCTGTGGCTCTTCGACGTTTGGAGCGA
GGAGAGGTGATTCGAGAGGGCGACGTTATGTCGTTTGTCATCACCACTGTGGGCTCCGAC
GAGTCTGCCAAGGCCCAGACCACTATGGATGTCAAGCTTTCTCGAGGCAAGCTTCAGCCG
GATGCCGAGTACTACATTTCCAAACAGCTGTACCCTCAGATCGAGCGACTCCTCGCTCAT
GTGACCGGTACTGATCCTGTCCGACTTGGAGAGGTGCTTGGCATCGAGATCAAGAAGGCC
CACCAGTCCCACGAGTCCCGAGAGCTGCTCCATCCGCTGGAGTCTACCATCTCCGATGCT
GAGCGGTTCAAGGATGCGGTTAAGCTGGAGCTGACTTGTGAGTGTGGCCACTCTTTTGCC
TACGAGGGAGTCAAGCAGAACACCACCGAGCACGGTATTATCTGTCCCTCTTGCTCCACA
ATGTTCCCTCTCACACGGCTGTGTGCCCAGTTGGAGACATCAATTCGACGACACATTTCC
AAGTACTACGAGACTTGGTACACGTGTTCAGATTCCGCCTGTGGTATTCGAACCGCCCAG
CTGACCAACTTTGGAAAGCGATGCATGGGTTCCGATGGCCGCTTCAACACTTGCAATCGG
GGCACTCTGGACTATGAGTACAACGATCAGGACCTGTACCGACAACTGTTGTACTTCGAC
ACTCTGTTCAACATGGACAAAGCAGCTCAGGAAAATGATAAGGATATGAAGCTGGCTGTT
CTGGCCGGTCAGAACCGGGAGCGGTTCGTGTACCCTCGCCAGGTGGTGGACAAGTATCTC
AAGGACTCTGGACGAGCCTTTGTGGATATGGCTGCAATTTTCGGTTAATGTGGAGGAGAT
ATTTATGTATACTAATGGACTTATTGATTATGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E11869g_CDS-001

Protein length: 1376 aa.
Product: Catalytic subunit of the DNA polymerase I alpha- primase complex, putative

>YALI0E11869g_CDS-001 MSRRNALAALKAARAGEKRELTFNAEDVYDELDETEFKQHRKQELLQDDFVVGDNGEGYA
DTGAYEWEDTGKRYGSSDEDGSPKSKRAKKNSDVIKNRKLNFKALASKPVKTETAASAVA
DDFMDDLIGVIGGSGPKSADKKKPMNRKSRSARAKEEEDVFVDMDYSYDMASPEHVSSSP
PAEIVHAVREEAIADGMDFADDMDIDMGEPDIPNKVPQSESDDDEDEVVVRPKAGQAAAA
VNMRGQKPVVAVKKEIVKTEPVKKELVKEDIEEPELVPDITSNIQLATSKAGSADTAKIS
VEPNEVTTEDGKFKFFWMEHAIVRDTLYLFGKTMVLTGKNKGQFVSCLIKVASTQRQMFV
LPKNECSTSDVHEELDGIMEARGIRMRAKPVTKKYCFHLPGVPAEAEYLEVLYSPPKEKF
DVPSSGATFSHVFGANQSLFEQFVLSHQVMGPCWMQIDEPDFASAGQGRISHTGIEITAK
SSAKISVCSNQEAPMPPISMISLAVRTMTEGKSQSVVAVTLRMFQDMPHDTTSKLGELQH
RSMTFFRYPSKVAPVGFKQILQEHNAGTAVDKIIPCNSELDILSHMVRLIARVDPDLICG
HRLEALHLDVLLHRLKELNVKDWSSMGRLRRTQWPHMNYGVLDGRLILDMDNSYGRSVVQ
GCQSFDLTEMSLNTLGIKRMDIELDAAHSKMVSSARPLLSYLMHCIQDTGLVAGIVIQTQ
AIPLSKQLTNLAGNAWNKTLAGTRSGRNESILLHEFTRQGYIIPDKEAGRGTNKRGKAKF
QGGLVLDPVKGLYDRHVLVMDFNSLYPSIIQEYNICFSTVDWASIPDDQIEPPAQPEPSV
EQGILPRLIRTLVQRRREVKRLIKDPKASAAQKKQWDVKQMALKLTANSMYGCLGFEGSR
FYAKPLANLTTSIGRDTLRATKELAEAESLQVVYGDTDSVMINTNTDTYKDAIKVGNDFK
KKVNGLYKQLEIDIDGVFARLLLTNKKKYAARLATEEGMGKIEVKGLDLRRRETCQISKD
ACTYVLEQVLGPDDQETALNNVHEYLFELAEKLRSGPVKDESAPFPVEHYAILKQLGKDP
KAYNPPIQPFVAVALRRLERGEVIREGDVMSFVITTVGSDESAKAQTTMDVKLSRGKLQP
DAEYYISKQLYPQIERLLAHVTGTDPVRLGEVLGIEIKKAHQSHESRELLHPLESTISDA
ERFKDAVKLELTCECGHSFAYEGVKQNTTEHGIICPSCSTMFPLTRLCAQLETSIRRHIS
KYYETWYTCSDSACGIRTAQLTNFGKRCMGSDGRFNTCNRGTLDYEYNDQDLYRQLLYFD
TLFNMDKAAQENDKDMKLAVLAGQNRERFVYPRQVVDKYLKDSGRAFVDMAAIFG*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG