YALI0E11847g

Overview

Description similar to uniprot|P22580 Saccharomyces cerevisiae YDR242W AMD2 Putative amidase
Locus type CDS
Locus tag YALI0E11847g

Location

Species Yarrowia lipolytica Positions 1437511..1439346
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1836 (nuc.)
Previous locus YALI0E11825g Next locus YALI0E11869g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E11847g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E11847gYALI0E11847g_mRNA-001YALI0E11847g_CDS-001

Nucleotide sequence

 

>YALI0E11847g
ATGACCTTCCAGGACGCAAAGGACATCTACAACAACCGTCTGCAAAAGTCAATTGAGGAG
GTGGACAAGTATTTCCCCGGAAGCCACAAACCCCTGCCCGATACTATCCCTTCCAACGTC
AGACCACTGCTCAAGCTGCTCCATGACGAAGACTACGAGGTTGTGACGCTAGGAGGAATC
GAACTGCTCGATAAACTGGCCAAGGGCGAATGGTCTGCCGTTCGAGTCACGGGTGCGTAC
ATTCGAGCTGCCGTGTTGGCCCACAAGCTGGTCAACTGCGCGACCGAATTCCTTGCAGAG
CGGGCCTACAACCGAGCCAAGTTCCTTGATGAACATCTGGCCCAAAAGGGGCCCGTTGGA
CCCTTCCACGGCTTGCCTTTCTCCGTCAAAGAGCTGCTGGGCGTCAAGGGACATATCTCC
ACCTGTGAAAACTCCTTCTTTCTGGACTCGGAGCCCATGGAAAAGGATCTGGTGCTGATC
CAGCAGCTGGAGAGCCAGGGGGGTACCATATTTGTGCGAACAAACGGCCCGCAGCTCTGT
AATTCTCTCGACAGTTACTCTCCTGTCCACGGTTCCACTCTCAACCCTTACAATACTTCT
CTGACCACTGGAGGCTCTTCTTCCGGAGAAGGAGCTCTGGCGGCCTTTGGAGCGAGTATC
ATTGGTCTGGGAACCGACATTGGAGGCTCCATTCGAGCTCCTTCTTCTTTCTGTGGAATC
TACGGTCTCAAGCCCACCAGGGGACGCCTTTCGATGCTCAATTGTGTGGGGTCCAACCCA
GGAAACGACTTCATCAAGGCCGTTGTAGGTCCCATGTCTCGAGACCTGCGTCTGATTGAT
TTGTTCATGGAGAATATCATCAAGCAAAAGCCGTGGAAGGACGATGTTTCCTTGGAGGCT
GTGCCTTGGGAGATTGTGTCTTCCATCCAGCCCAAGAAGCTGACTCTGGGATACACCACC
TTTGACGGGGTGGCCCATCCTCATCCCCCTATTGTACATGCAATTGAAGAGCTGGTCAAG
AAGAACGATGGAAAGACTGTGGACGGAGTGGAAATCACTTTCAAGAAGTACACCCCTGTC
ATTCCTGAAGATATTATCCACATGCTCATTGGAATGTTCATGCCCGACGCTGGAGAGCGA
ATCAAAAAGTGGTCCGAGAAGTTTGGAGAGCCCTTGGATGACCCTGGCCCGGAGGTCAAG
GCTCTGGCCAAGAAGCTGGAAATTAGCGATGTCTTTGCCCTCAACACCAAGCGAGACAAG
TATAGACAGACCGTGTGGGAGGACTGGAAGAAGCAGGGGATCGATGCGGTGATTTATCCT
GTATACATTTCGCCCTCGTCTGTGATCCGAACACCCAATTATGGATTGTACACCATGCTG
TGGAACGTGGTGGACTACCCGGGAGTGACTCTTCCTCTAACCAAGATGGACGCCAAGAAG
GACTACGGTCCTACTCCTGAGCCTGCCAATGACATGGACAAGAAGTTCCTGGGCATGTAC
GAGCCGGAGAAGTTCGACAATGCTCCCATTGGAGTTCAGATTATCGGCCCTCGGTTTGAG
GAGCCTCTGCTGCTCAAGGTGGCTCAGCTTCTCCAGGGCACTGTTCAGCCTTTGGGCGAG
TAGGTATTTTGACCACAATTGATGTTATTGAACAGGAACTTTTCACAAGTAGTGATTACT
GTAGCGACAGGTACATACTGTGATACAGTGACAGATGTGTTTGAGAGTCGGCACTGTAGT
CAGATCACTATGTACACTACGTAGTAGAACTATCACGACCATGCCAGTACTACCATAAAT
GTTTTTTTATTTTATTTGATTTTACAGTGATCAATA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E11847g_CDS-001

Protein length: 541 aa.
Product: Amidase, putative

>YALI0E11847g_CDS-001 MTFQDAKDIYNNRLQKSIEEVDKYFPGSHKPLPDTIPSNVRPLLKLLHDEDYEVVTLGGI
ELLDKLAKGEWSAVRVTGAYIRAAVLAHKLVNCATEFLAERAYNRAKFLDEHLAQKGPVG
PFHGLPFSVKELLGVKGHISTCENSFFLDSEPMEKDLVLIQQLESQGGTIFVRTNGPQLC
NSLDSYSPVHGSTLNPYNTSLTTGGSSSGEGALAAFGASIIGLGTDIGGSIRAPSSFCGI
YGLKPTRGRLSMLNCVGSNPGNDFIKAVVGPMSRDLRLIDLFMENIIKQKPWKDDVSLEA
VPWEIVSSIQPKKLTLGYTTFDGVAHPHPPIVHAIEELVKKNDGKTVDGVEITFKKYTPV
IPEDIIHMLIGMFMPDAGERIKKWSEKFGEPLDDPGPEVKALAKKLEISDVFALNTKRDK
YRQTVWEDWKKQGIDAVIYPVYISPSSVIRTPNYGLYTMLWNVVDYPGVTLPLTKMDAKK
DYGPTPEPANDMDKKFLGMYEPEKFDNAPIGVQIIGPRFEEPLLLKVAQLLQGTVQPLGE
*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG