YALI0E11825g

Overview

Description similar to uniprot|P32854 Saccharomyces cerevisiae YOR036w PEP12 syntaxin
Locus type CDS
Locus tag YALI0E11825g

Location

Species Yarrowia lipolytica Positions 1435033..1436015
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 983 (nuc.)
Previous locus YALI0E11803g Next locus YALI0E11847g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E11825g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E11825gYALI0E11825g_mRNA-001YALI0E11825g_CDS-001

Nucleotide sequence

 

>YALI0E11825g
ATGGATCTCGAAAACCAGAAAGTGCCGTTCCAGCAGGTGACCACGGAGCTGTCCGATTCG
CTGCAGACCATCTCGGCCGACGTGGCGAAACTCGACCGGTTTGTGTCGTGGATCGGAACC
CGAAAAGATGGAGATACCAACCGTGGCCGTGTCACCGATCTGGCGGAGAAAATCACCGCC
GACATCAAAACCATGCATGCCAACGTGCGCCGGCTCAACATGTTTCCCGAGGCGGAGCTG
TCCAACACGGAGCAGTTTGCCCAGAAACGGCTGAGCAACGAGTTCGGCCTGCTCCTGAGC
CGGTTCCAAAACCTGCAGCATCAGAGTACCGATGCGTACAAGAGGCAGGATACTGCAGCC
CGAGCGGCCCTGGAGGAAGAACGGAGCGAACAGGACCGCCTGCTGGCAGCCAAGCCCATG
GGCATGAACAACACCAACTACGGAGGACTGCAGGACCAGCTGCTGGACGTGGTGGACCAG
TCGGAGGTGGACCTGCAACAGGTGCTCATTGCTGAGCGAGAGGAGGACATTCGGGGCATC
GAACAGGGCATCAACGACATTAACGGCATCTACAGAGACCTCGGTGCGTTAATAGCCCAC
CAGGGAGAACAGATGGACTCTGTGGAGAACAACATCTCCACGGTGGCGGATCAGACCTCC
GCAGCTGCTGGAGAGCTCGTCAAGGCCAACGATTACCAGAAAAAGCGAAGAACTTGTTCT
CTGATTGTCCTTGGAATCATGATCCTCGCCCTCATCATCATTCTAGCAGTCGCCGCGTAA
CGATTCCAGAGTTAATGGTACCTACGCGCCTCAGTCAACACCTTCAACACACCCCACACT
AATAATAAGACATTCGCATCTAAATGTCGCCCCCTTCAACCAACCAAAAACAAAAACGCT
CAACGCGCCTACTAACGATATCAACTATCAGAATGCATCTAGTATTTAGTCAAATTAAGA
CGTGAATATATACATGAACAAGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E11825g_CDS-001

Protein length: 260 aa.
Product: Target membrane receptor (t-SNARE), putative

>YALI0E11825g_CDS-001 MDLENQKVPFQQVTTELSDSLQTISADVAKLDRFVSWIGTRKDGDTNRGRVTDLAEKITA
DIKTMHANVRRLNMFPEAELSNTEQFAQKRLSNEFGLLLSRFQNLQHQSTDAYKRQDTAA
RAALEEERSEQDRLLAAKPMGMNNTNYGGLQDQLLDVVDQSEVDLQQVLIAEREEDIRGI
EQGINDINGIYRDLGALIAHQGEQMDSVENNISTVADQTSAAAGELVKANDYQKKRRTCS
LIVLGIMILALIIILAVAA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG