YALI0D27610g

Overview

Description Highly similar to uniprot|Q6C3G5 Yarrowia lipolytica YALI0E35046g SSA6/SSA-D HSP70 protein
Locus type CDS
Locus tag YALI0D27610g

Location

Species Yarrowia lipolytica Positions 3658803..3660734
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1932 (nuc.)
Previous locus YALI0D27588g Next locus none

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D27610g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D27610gYALI0D27610g_mRNA-001YALI0D27610g_CDS-001

Nucleotide sequence

 

>YALI0D27610g
ATGTCTAAAGCAGTAGGAATCGATCTTGGAACCACATACTCCTGTGTGGCCCATTTCGCC
AATGACAGAGTCGAAATCATCGCCAATGACCAGGGAAACAGAACTACTCCCTCGTTTGTG
GCCTTCACCGACACTGAACGACTCATTGGTGATGCTGCCAAGAACCAGGCTGCCATGAAC
CCTGCAAACACAGTCTTTGACGCCAAGCGACTGATTGGCCGAAAATTCGACGACCCTGAG
GTCCAGAATGACGCCAAGCACTTCCCCTTCAAGATTATCGACAAGGCTGGAAAGCCCAAC
ATCGAGGTCGAATTCAAGGGCGAAACCAAGGTCTTCACCCCCGAAGAGATCTCCTCCATG
ATCCTCACCAAGATGAAAGAAACTGCTGAGGGATACCTCGGAACAAAGGTGAACGACGCT
GTTATTACCGTTCCCGCATACTTCAATGATTCTCAGCGACAGGCCACCAAGGACGCAGGT
CTTATTGCTGGTCTGAATGTTCAGAGAATTATCAACGAGCCTACCGCTGCCGCCATTGCC
TACGGTCTCGATAAGAAGGAGACTGGCGAGCGAAACGTGCTCATTTTCGATCTTGGAGGA
GGAACTTTTGATGTTTCTCTTCTGTCTATCGAAGACGGCATCTTTGAGGTCAAGGCCACC
GCTGGAGATACCCATCTCGGTGGTGAGGACTTTGACAACCGACTCGTGAACCACTTTGTT
CAGGAGTTCAAGCGAAAGCACAAGAAGGACATCTCCTCCAACCAGCGAGCTCTCCGACGG
CTGCGAACCGCTTGTGAGCGAGCTAAGCGAACCCTTTCGTCTTCCGCTCAGACATCCATC
GAGATCGACTCTCTCTATGAGGGTATTGATTTCTACACCTCCATCACTCGAGCCCGATTC
GAGGAACTCTGTCAGGATCTCTTCCGAGGCACTCTTGAGCCAGTTGAGAAGGTCCTGAAG
GACGCTAAGATGGACAAGGCCTCAGTCAACGAGATTGTCCTTGTTGGTGGCTCCACTCGA
ATCCCCAAGGTGCAGAAGCTCGTTTCTGACTTCTTCAACGGAAAAGAGCTGAATCGATCT
ATCAACCCTGATGAGGCTGTTGCCTACGGTGCTGCCGTCCAGGCTGCCATCCTTTCTGGT
GACACTTCCTCGTCCACTCAGGATATTCTGCTCCTTGACGTTGCTCCCCTTTCTCTTGGA
ATCGAGACTGCTGGCGGTGTTATGACCAAGCTCATCCCCCGAAACTCGACTATCCCCACC
AAGAAGTCTGAGACCTTCTCCACCTACGCTGACAACCAGCCTGGTGTTCTGATTCAGGTC
TTTGAGGGTGAGCGAGCTCAGACCAAGGATAACAACATCCTTGGCAAGTTTGAGCTGTCC
GGTATTCCCCCCGCTCCTCGTGGTGTTCCTCAGATCGAAGTCACCTTTGACGTTGATGCC
AACGGTATTCTCAACGTCTCCGCAGTTGAGAAGGGTACTGGTAAGACTCAGCAAATCACT
ATCACCAACGACAAGGGCCGACTTTCCAAGGAGGAAATTGAGCGAATGGTGAACGACGCT
GAGAAGTACAAGGACGAGGACGAGAAGGAGGCTGCCCGAATTGCCGCCAAGAACGGCCTC
GAGTCTTACACCTACTCTCTCAAGAACACTCTCTCCGAGGAGAAGTTCAAGGAGAAGGTT
GACGAGGCCGAGCGTGAGAAGCTTGAGAAGGCCATCAACGAGACCATTGAGTTCCTCGAT
GCTACTCAGTCCGGTGCTACTGAAGAGTACTCCGATAAGCAGAAGGAGCTCGAGGGTATT
GCGAACCCCATCCTTATGAAGTTCTACGGAGCTGACGGTGGTGCTCCCGGTGGAATGCCC
GGAGGAGGCATGCCTGGAGCTGGAGCCGCCCCTGGTGGTGGCGAGGGTCCCACTGTGGAG
GAAGTCGACTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D27610g_CDS-001

Protein length: 643 aa.
Product: HSP70 protein

>YALI0D27610g_CDS-001 MSKAVGIDLGTTYSCVAHFANDRVEIIANDQGNRTTPSFVAFTDTERLIGDAAKNQAAMN
PANTVFDAKRLIGRKFDDPEVQNDAKHFPFKIIDKAGKPNIEVEFKGETKVFTPEEISSM
ILTKMKETAEGYLGTKVNDAVITVPAYFNDSQRQATKDAGLIAGLNVQRIINEPTAAAIA
YGLDKKETGERNVLIFDLGGGTFDVSLLSIEDGIFEVKATAGDTHLGGEDFDNRLVNHFV
QEFKRKHKKDISSNQRALRRLRTACERAKRTLSSSAQTSIEIDSLYEGIDFYTSITRARF
EELCQDLFRGTLEPVEKVLKDAKMDKASVNEIVLVGGSTRIPKVQKLVSDFFNGKELNRS
INPDEAVAYGAAVQAAILSGDTSSSTQDILLLDVAPLSLGIETAGGVMTKLIPRNSTIPT
KKSETFSTYADNQPGVLIQVFEGERAQTKDNNILGKFELSGIPPAPRGVPQIEVTFDVDA
NGILNVSAVEKGTGKTQQITITNDKGRLSKEEIERMVNDAEKYKDEDEKEAARIAAKNGL
ESYTYSLKNTLSEEKFKEKVDEAEREKLEKAINETIEFLDATQSGATEEYSDKQKELEGI
ANPILMKFYGADGGAPGGMPGGGMPGAGAAPGGGEGPTVEEVD


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG