YALI0D27588g

Overview

Description similar to uniprot|Q4WHT9 Neosartorya fumigata HmgA Homogentisate 1,2-dioxygenase
Locus type CDS
Locus tag YALI0D27588g

Location

Species Yarrowia lipolytica Positions 3657256..3658704
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1449 (nuc.)
Previous locus YALI0D27566g Next locus YALI0D27610g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D27588g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D27588gYALI0D27588g_mRNA-001YALI0D27588g_CDS-001

Nucleotide sequence

 

>YALI0D27588g
ATGCCTCAAACTACCTTTGACAACGCTGACAAGTACGAGTACCAGAGTGGCTTCCAGTCC
CATCACGACACTGAGGCTGTCAAGGGTGCCCTTCCTGTGGGCCAGTTTTCACCTCAGAAA
ACCCCCTTCGGTTTGTACCCCGAAAAGCTGTCAGGCACAGCCTTTACTGCCCCTAGACGA
AATAACTTCCAGGCCTGGGTATACCGACGGAAACCCAGTGTGGTCCATCGACCTTTTAAG
AAGAGTACCCGACTGGTCCACCCTTACAACGAACTCAAAGACCTCGATTACCTGCCCAAC
CAGATGAGATGGTCTCCCTTTGACCTGCAGAGTGTGGTTGCCAACGGCCTTACTGGTACC
GATGGCACCTACTGCGAACGTGAGAAGACTACATTCGTCCAGGGTATCAGAGCTCTGGGT
GGCTCTGGAACCCCCGTTCAGAAACATGGAATGGCCATTTACATCTACGCTGCCAACGCC
CCCATGGAGAAAGAGGTTCTTTACAACGGTGATGGTGACTTCCTCATTGTGCCCCAGTGC
GGTGAGCTTGACATTCAGACCGAATTCGGCTTCCTCCACGTTAGACCCAACGAAATCTGT
GTCATCCCTCGTGGTATCCGGTTCAACGTCAAGCAGGCAAGCGGAAATCCCTCGGAATTG
ATGAGAGGCTACATTCTGGAAGTTTTTGATGGCCACTTCGATATTCCTGACCGAGGTCCC
ATTGGAGCCAACTCTCTTGCTAACGAGCGAGACTTCCTAGCCCCCAAGGCCTCTTACGAT
ACAAGCGAAGCCTCCATGACTGACGAGTGGACCATGATCTTCAAGTTCAATCACTCCTTC
CACGAGTGCGTTCAGGATCACACCCCCTTCGATGTTGTTGCATGGACTGGCAATTATTAT
CCCTACAAGTATGATCTGGGAAGATACAACACGATTGGCTCTGTGTCTTATGACCACCCT
GATCCCTCCATTTTCACAGTTCTCACCTGCCAGTCCAGCACCCCTGGTACCGCGATTGCA
GATTTTGTCATCTTCCCCCCCAGATGGCTGTGTGCCGATCATACTTTCCGACCACCCTAC
TTCCACAGAAACTGCATGTCCGAGTTCATGGGCCTCATTTCCGGAGACTACGATGCAAAG
GCCGGAGACGGCTTTGCCCCTGGTGGGGCATCCCTTCACAACGTGTTTGCACCTCATGGT
CCAGACGCCGACACTTATGTCGGAGCCACTGAAAAGCTCAAACCCACCCCTGGTCTTCTT
CCTGATGGATCCGATGCTCTTAAGCCTGCATTTGTCGGCCAAGGGTCCATGGCTTTCATG
TTCGAGAGCATGTTCATGATGGGGGTGACGAAGTTCGCTGTCGAGACCAGCCACAAACTT
CAGGAACGCTACAACGAGTGCTGGGCTAATCTCGCTGACCCTAACCAGCTTCCTGTCACG
GGCAAATAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D27588g_CDS-001

Protein length: 482 aa.
Product: Homogentisate 1,2-dioxygenase, putative

>YALI0D27588g_CDS-001 MPQTTFDNADKYEYQSGFQSHHDTEAVKGALPVGQFSPQKTPFGLYPEKLSGTAFTAPRR
NNFQAWVYRRKPSVVHRPFKKSTRLVHPYNELKDLDYLPNQMRWSPFDLQSVVANGLTGT
DGTYCEREKTTFVQGIRALGGSGTPVQKHGMAIYIYAANAPMEKEVLYNGDGDFLIVPQC
GELDIQTEFGFLHVRPNEICVIPRGIRFNVKQASGNPSELMRGYILEVFDGHFDIPDRGP
IGANSLANERDFLAPKASYDTSEASMTDEWTMIFKFNHSFHECVQDHTPFDVVAWTGNYY
PYKYDLGRYNTIGSVSYDHPDPSIFTVLTCQSSTPGTAIADFVIFPPRWLCADHTFRPPY
FHRNCMSEFMGLISGDYDAKAGDGFAPGGASLHNVFAPHGPDADTYVGATEKLKPTPGLL
PDGSDALKPAFVGQGSMAFMFESMFMMGVTKFAVETSHKLQERYNECWANLADPNQLPVT
GK


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG