YALI0D27500g

Overview

Description highly similar to uniprot|Q00381 Saccharomyces cerevisiae YJR058c APS2 Small subunit of the clathrin- associated adaptor complex AP-2
Locus type CDS
Locus tag YALI0D27500g

Location

Species Yarrowia lipolytica Positions 3648596..3649532
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 937 (nuc.)
Previous locus YALI0D27478g Next locus YALI0D27522g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D27500g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D27500gYALI0D27500g_mRNA-001YALI0D27500g_CDS-001

Nucleotide sequence

 

>YALI0D27500g
ATGGCCATCCAATATCTGCTGTTGCTATCGCGTCAGGGCAAGGTTCGTCTGGCCAAATGG
TTCACAACTCTCGGCACCCGTGAAAAGGCCAAGATCGTCAAGGAGGTTACTGCACTGGTT
CTTTCCAGACGAACAAAGATGTGCAATGTCATTGAACACAAGGGTGAGTAAGATAAGGAG
GACGTGACTGCGTTGGCTCGATGACTTACCAAGCGCGAGTTGGTTCACTTCTTGCTGAGC
CACCGTCAGAAATTCTTCCAAGAAGAGTACCTCTACGAAACACCACATCCACAATGAGTG
CTGTGGCTTAGTTCATTGTGCTGTGAAGTGGCAAGAAGAGCGCTGCAGAGCTACACTTTC
TTGGGGTCGGTAAAAATGGCTCACTGATCGCCGAGGTGTCTGATACCGAGCTATCGGAAA
CATTACAGCAGTAGTGACGACGCGAGAGAGAAAAGGAGCTGTGCGGCAGATGACGACAAG
ACTACACGACCCGTCAGAAGACTGCACAAAAGGAGTGGACAAATAAGTCACTTTGTATTG
TTGATTCAATACTGCGGCAGTCTCCCAGTCCAGTGGGCAATGTTGTGTCCTCAGTGATGC
ACAACCACGAAAAAAGACTAACACAGAAACCAAGGTTGTTTTCAGACGTTATGCATCGCT
ATTTTTCATTACAGGCATCGACTCCGATGACAACGAACTAAACACTCTCGAAATCATTCA
CAGATACGTTGAGCAGATGGACAAGTATTACGGCAACGTGTGCGAGCTCGATATCATCTT
CAACTTCCAAAAAGCATACTACATTCTCGACGAGATTGTGGTCGGAGGAGAGATCCAGGA
GTCGTCGAAGCGAGAGGTTCTTAGACGAATCTCTCAGCAGGATGCTCTGGAGGCAGCCGA
AAACGAGGAGGAGGGTCTGTCGAGACTATTGGCATAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D27500g_CDS-001

Protein length: 157 aa.
Product: Clathrin Associated Protein complex Small subunit, putative

>YALI0D27500g_CDS-001 MAIQYLLLLSRQGKVRLAKWFTTLGTREKAKIVKEVTALVLSRRTKMCNVIEHKETKVVF
RRYASLFFITGIDSDDNELNTLEIIHRYVEQMDKYYGNVCELDIIFNFQKAYYILDEIVV
GGEIQESSKREVLRRISQQDALEAAENEEEGLSRLLA


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG