YALI0D27478g

Overview

Description similar to uniprot|A0A0D9MZU8 Aspergillus flavus P034_00280408 Haloacid dehalogenase-like hydrolase
Locus type CDS
Locus tag YALI0D27478g

Location

Species Yarrowia lipolytica Positions 3647495..3648259
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 765 (nuc.)
Previous locus YALI0D27456g Next locus YALI0D27500g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D27478g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D27478gYALI0D27478g_mRNA-001YALI0D27478g_CDS-001

Nucleotide sequence

 

>YALI0D27478g
ATGACTGCCACTTCTACAATCAACGGTACTCCCGCAATGGCCACCAACCCCAAGGCCATT
GTCTTTTCCGACTGGGATGGAACCATTACTCTGCAGGACTCCAACGACTGGCTCACCGAC
AATCTCGGCTTTGGAGTCGAGAAGCGAAAGTTCTACAACGCAGAGATCCTCCACGAGCGA
ATGTCCTTCTCCGAGGCCTTCAAGATCATGTTGGATTCCGTCAAGACCCCCTTCCCCGAG
TGTATCGAGCAGCTTCTCAATAACATTGACCTCGATCCCGGGTTTGCCGTCTTCTACAAG
TGGTGCAAGGAACGAAATATTCCCGTGGTCGTGGTTTCATCTGGTATGAAGCCCGTCATC
TTTGCTCTGCTCAAGAAGCTGGTTGGAGAGGAGGCCGCAGATGACATTGAGATCATCGCT
AACGATGTGAAGATCGAGCCTGATGGAGAGTGGAACATTGTCTACCGAGACGAGTCGCAT
TTTGGCCACGACAAGTCCCGATGCATCAAGCCCTACGCCGAGCTCCCCGAGGGCAAGCGA
CCCACCATGTTCTACTGTGGTGACGGTGTCTCTGATCTCTCTGCCGCAAGGGAGACAGAT
CTGCTGTTCGCCAAGGCTGGCAAGGATCTGATTGTCTACCTCGAGAAGATGTCTCTGCCT
TACAACATCTTCCACTCCTTCGCTGATATCAACAAGCGAGTCGACGAGATCTACTCCGGA
AAGCTCACTCTCAAGGAGGCTGAGGCCACCCATACCATCCAGTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D27478g_CDS-001

Protein length: 254 aa.
Product: Haloacid dehalogenase-like hydrolase, putative

>YALI0D27478g_CDS-001 MTATSTINGTPAMATNPKAIVFSDWDGTITLQDSNDWLTDNLGFGVEKRKFYNAEILHER
MSFSEAFKIMLDSVKTPFPECIEQLLNNIDLDPGFAVFYKWCKERNIPVVVVSSGMKPVI
FALLKKLVGEEAADDIEIIANDVKIEPDGEWNIVYRDESHFGHDKSRCIKPYAELPEGKR
PTMFYCGDGVSDLSAARETDLLFAKAGKDLIVYLEKMSLPYNIFHSFADINKRVDEIYSG
KLTLKEAEATHTIQ


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG