YALI0D27390g

Overview

Description weakly similar to uniprot|Q6C189 Yarrowia lipolytica YALI0F18326g
Locus type CDS
Locus tag YALI0D27390g

Location

Species Yarrowia lipolytica Positions 3638737..3639936
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1200 (nuc.)
Previous locus YALI0D27368g Next locus YALI0D27412g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D27390g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D27390gYALI0D27390g_mRNA-001YALI0D27390g_CDS-001

Nucleotide sequence

 

>YALI0D27390g
ATGAACCATCTTTGCTCTTCATCTCACCTCTCCAGCAATTTACATCCAAACAACTCATGC
GATAGCACCATGGACTGTGGCAAACACAAGAGGCTTCGAGACGAAGGTGACGACGCCTTC
GACTTCTACGAAGAGTACGAGCATCTTCGACCGCAGAAGATCAGGCCTACTTCCATGGCC
AAGATAATGAACTTGACCCTACACAACCTCGAGTTACTGCACTTCTTTGTCGAAAACACG
GGGCCAATGTTGGTCCAAGTTACAGGGGAAAGAGATTCCCGATGGATGGGGGCGGCTCCC
CAGCTGTCCATGAGCTCCCGAGCCCTGTCGCAGGCATGCCAAGTTTTTGCTGAAGCCCAC
AAGTTCCACAAACAAAATCCATACAGATACCTCTTGGAGGGCGAAACGCCTTACCCAAAG
TCGAAAGGAAAGCCGAAGGACATGGGCAGGGTCATTGGTTATGTTCCTGTGTCTGATAAG
CACCTAGAGCAACAGATGCTGGGGTTTACGAAGTGCCTAAAAACTTTAAGGATGGAGATC
GAGAAGCTGGACGAAACAGCTAACTTCGACCGTGTATTGACTGCTGCTGTCATTGTCTCT
CTGTGTGCCATGGGAAGTACCAGTTTTGTTCCTCTGGTCAACTTTGAAGGCAAGGGAGAC
CTTTTTAGTGTCTTGAGGATCATAAATGACATTCAGAGCATTTACAATTACAGGTTGAAC
GAAAGGGATATCTCAATGGTTGCTCTTACACATCGTGTGCCTCTTCCAAATCGATTACAG
CTTCCACACGAAGATGAGCTTCGAAGTATTGTGGGGTTGGTTAACGGTGTTGGTGCGGAA
GAGCGGCGGGTCAGAGGTATTCTGGAGAGGGAAATCCACACCCTAGTGGAGTTATATAAC
ATGGATATCGAGAGTAAGAGCGTTGCTCATATGGTCGCATGGTGCGTTTACTGGCAACCT
GGGTTTTCTGAGCTCAAGGAGAAACGCAATCACTATGCACTCCTCGTCATCTGTTTTTGG
TGTGCGTATGTCCACAGATACCATGCCCTCTTCTGGTGGGGTGATCGACTACAAGAGGAT
CTGTACAATATCGTTGACAGGCTGCCTCAGCATCTCATTCAGTACGTTGAGTGGCCCCTG
AGAGCGGTGATGAATTTCGAATACGACCATTTGGAATGGATCCAGAAAAACTCGAGTTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D27390g_CDS-001

Protein length: 399 aa.
Product: Conserved hypothetical protein

>YALI0D27390g_CDS-001 MNHLCSSSHLSSNLHPNNSCDSTMDCGKHKRLRDEGDDAFDFYEEYEHLRPQKIRPTSMA
KIMNLTLHNLELLHFFVENTGPMLVQVTGERDSRWMGAAPQLSMSSRALSQACQVFAEAH
KFHKQNPYRYLLEGETPYPKSKGKPKDMGRVIGYVPVSDKHLEQQMLGFTKCLKTLRMEI
EKLDETANFDRVLTAAVIVSLCAMGSTSFVPLVNFEGKGDLFSVLRIINDIQSIYNYRLN
ERDISMVALTHRVPLPNRLQLPHEDELRSIVGLVNGVGAEERRVRGILEREIHTLVELYN
MDIESKSVAHMVAWCVYWQPGFSELKEKRNHYALLVICFWCAYVHRYHALFWWGDRLQED
LYNIVDRLPQHLIQYVEWPLRAVMNFEYDHLEWIQKNSS


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG