YALI0D27302g - PEX23

Overview

Description uniprot|Q9UV60 Yarrowia lipolytica YALI0D27302g PEX23 Integral peroxisomal membrane protein, putative lipoate-protein ligase B activity, required for matrix proteins localisation
Locus type CDS
Gene name PEX23
Locus tag YALI0D27302g

Location

Species Yarrowia lipolytica Positions 3628214..3629502
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1289 (nuc.)
Previous locus YALI0D27280g Next locus YALI0D27324g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D27302g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D27302gYALI0D27302g_mRNA-001YALI0D27302g_CDS-001

Nucleotide sequence

 

>YALI0D27302g
ATGTCGGATAAGGAGAAGAAAAAGAGCAGTGCGACGCACGCGGCCTTCCCTCCCTCAACG
GCCTCGCAGCCTCAATCAATGAGTCCCCTGCTGTCTTCCACTCCACCAACAGTCACCAAG
GCACTAGCTCAAGCATACCCATACATTCTGGCCAGCGACAAGGTGCTGGGTCTGCTGACA
TGGACTGAGGATGATCAATGGCAGAGCTTTCTGTTGGTGGCCGTCTACGTGACCGTGGTC
ATGTACTACGAATACTTGGTCATCTACTGTGGTCACATTCTTGCCGTGGGCTTCATCTGG
GCCTTTGTGTACATTCGACAAAGTGTGGAGAGACGGCAAACATCGGAGCCCTCTCTGGAT
GCAATTGTGCACACGCTGACCAATGTCACCACCAAGGCAAATCTTCTGCTGCTTCCAATC
ACCTCTCTGAGCCTGACCCCCAGAGATGTGACCCGATTGGCATTCACCACGCTCTTCCTA
TCGCCTCTGTATATGTTTGGTGCCTACTTTTTCCTTGGACCCCGAAAGTTCCTGCTCACT
ACCGGCGTCTTCTTCCTCACCTACCATTCCATGGCTGCCCGAGTCACACGAGCAGTCATC
TGGAAGTCCAAGGCCATTAGACTGGTCACCTTCTACCTCACTGGACTCGACTTTTCCAAC
ACAAAGCGAAACCTGGGCGCCTTTGGATTCACCCAATCGCCCCTGTCGGTGCAGTCCAAG
GACGGAAAGCCCGTGCGGTTCACCTACGTACTGTATGAGAACCAACGACGATGGCTCGGT
ATTGGCTGGACCGCCAACCTTCTGGCCTACGAGCGAACTCCTTGGACCGACGAGTTCCTC
AACGAGGTTACTCCTCCTTCTGAGTTCAAGCTGCCCGATACAGAGGGCACCGGCATGAAG
TGGCAGTGGGTCGATCCTACTTGGCGATTGGACTGTACCAACGATGGCGCCCTGGTCATT
ATTGGCAACAAGGCTTTGAGCACGCCCGATCCTTCTCCCTCCGAGGGATGGATCTACTAT
GACAACACATGGAAGCGACCTACTGCAGACGACTCTTTTAGCAAGTACACCCGACGACGA
CGATGGGTGCGAACTGCTGAGCTCATCACCGTCACCAAGCCCACTGATGTGGTGGTCACT
GTCGAGGAGGATGGTGTGACTGACGCTGCTGGAGATGTGGAGATCATCACCACCGAGACC
GAGGAGAAGGTGCGAAGACGAAAGGGCATTAGATTCGAGGAGGACTCTTAAGAGATAATT
AAATATATGAATGTATCATTTTTTTACGC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D27302g_CDS-001

Protein length: 417 aa.
Product: Integral peroxisomal membrane protein, putative lipoate-protein ligase B activity, required for matrix proteins localisation
Gene: PEX23

>YALI0D27302g_CDS-001 MSDKEKKKSSATHAAFPPSTASQPQSMSPLLSSTPPTVTKALAQAYPYILASDKVLGLLT
WTEDDQWQSFLLVAVYVTVVMYYEYLVIYCGHILAVGFIWAFVYIRQSVERRQTSEPSLD
AIVHTLTNVTTKANLLLLPITSLSLTPRDVTRLAFTTLFLSPLYMFGAYFFLGPRKFLLT
TGVFFLTYHSMAARVTRAVIWKSKAIRLVTFYLTGLDFSNTKRNLGAFGFTQSPLSVQSK
DGKPVRFTYVLYENQRRWLGIGWTANLLAYERTPWTDEFLNEVTPPSEFKLPDTEGTGMK
WQWVDPTWRLDCTNDGALVIIGNKALSTPDPSPSEGWIYYDNTWKRPTADDSFSKYTRRR
RWVRTAELITVTKPTDVVVTVEEDGVTDAAGDVEIITTETEEKVRRRKGIRFEEDS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG