YALI0D27214g

Overview

Description some similarities with uniprot|Q8TFK5 Yarrowia lipolytica YALI0E18788g CWP1 Cell wall protein of the PIR family
Locus type CDS
Locus tag YALI0D27214g

Location

Species Yarrowia lipolytica Positions 3620256..3621071
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 816 (nuc.)
Previous locus YALI0D27192g Next locus YALI0D27236g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D27214g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D27214gYALI0D27214g_mRNA-001YALI0D27214g_CDS-001

Nucleotide sequence

 

>YALI0D27214g
ATGCAGTTCTCCGCCGTTCTTCTTGCCGCTGCCGCCGGCCTCGTCTCCGCCCAGAAGTTC
TCTCTCGTTGCCATCCGATCTGGCTCCGACATCCAGAACGACGCCATCACCTCCGATGGC
AAGTCCCTTGTCCTCAACGGCAACACCCCCACCACCTACGAGGTGATTGGCCGATCTCTG
TACGCCAACGGTAAGCCCGTCCAGTTCGGTGACAACGCCACCATTGTGGCCACCGACGGT
CAGGCCTCCAAGGACATCATTGTCAACGGTGACAACCATCTCTACGTCCCCAACTTTGAC
TTCACTGCCTGCCCCAACGGCAAGAACGGTTACGACATTGTCAACAACCAGTTCTGCAAG
TCTGGAGGTCTCGGCTTTGCCGCTCGAGCTGTCTTCGAAGGTGGCTCTTCTTCCGCCGCT
GCTCCCACCTCTTCCTCCGCTGCTTCCCATGCCGCCTCTTCCGCTGCCGCCTCTGCTTCT
CACGCTGCTTCTTCTGCTGCTGCTTCCAAGGCTTCTTCTGCTGCTGCTTCCAAGGCTTCT
TCTGCTGTTGCCGCCCCCAAGTCCGAGGCCGCTGCTGGTGCTCACGCCACTGCCGGTGCC
ATTGTCTCCCAGATCAATGATGGCCAGATCCAGGCTCCCCACTCCACCGGCCCTGCCCAG
GCCCCCAAGGCCTCTGCTCCTCCCGCCCAGGCCAACGGCGCTGCCACCCTTGGTGTCTCT
GCTGTTGCCGGTGCTGTTGCCGTCGCCATGCTTTTCTAAGCATGTCTTGTTTTTTTATAT
AATGATCATAATTAATTAATACCCCTAATGAAGTGA

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0D27214g_CDS-001

Protein length: 253 aa.
Product: Cell wall protein, putative

>YALI0D27214g_CDS-001 MQFSAVLLAAAAGLVSAQKFSLVAIRSGSDIQNDAITSDGKSLVLNGNTPTTYEVIGRSL
YANGKPVQFGDNATIVATDGQASKDIIVNGDNHLYVPNFDFTACPNGKNGYDIVNNQFCK
SGGLGFAARAVFEGGSSSAAAPTSSSAASHAASSAAASASHAASSAAASKASSAAASKAS
SAVAAPKSEAAAGAHATAGAIVSQINDGQIQAPHSTGPAQAPKASAPPAQANGAATLGVS
AVAGAVAVAMLF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG