YALI0D27192g

Overview

Description similar to uniprot|P38817 Saccharomyces cerevisiae YHR108W GGA2 (ohnolog of YDR358W) Golgi-localized protein with homology to gamma-adaptin
Locus type CDS
Locus tag YALI0D27192g

Location

Species Yarrowia lipolytica Positions 3615953..3617881
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1929 (nuc.)
Previous locus YALI0D27170g Next locus YALI0D27214g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D27192g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D27192gYALI0D27192g_mRNA-001YALI0D27192g_CDS-001

Nucleotide sequence

 

>YALI0D27192g
ATGGCTGACTACACCGCCCGCTTTCGAGTGGACGACGACTACTACGTGCAAGCCACGCCC
CGAACCGGCAGTGGATCGTCGCAGTCCAATGCAAAACTGTTCAAGCTAATCAGCGCAGCT
TGTGCCCCCCATCTGGTGGAGCCCAACCTAGCGCTGGACTTTGAAGTCGCCGACTACATC
AACTCCAAAAAGGGCAATAGCGCTCGGGACGCTGCCCAGGCCATTGTCAAGCTCATCAAC
CACCAGTCCCGAAACGTGTCCATCATGGCTCTGTCGCTGCTGGACATTTGTGTCAAGAAC
TGTGGCTACCCTTTTCACCTACAAATCTCCCGAAAAGAGTTTCTCAATGAACTGGTTAAG
AAGTTCCCCGAGAAGCCCCCAATGAACTACACTCACACCCAGTGTCTGATCTTGGAGGTG
CTGCAGGACTGGCGAGAAACACTTTGCAAGCACTCGCGGTACAAGGATGACCTGGGATAC
ATCAGAGACATGCACCGGCTGCTGACCTACAAGGGCTACCACTTCCCCGAGGTCAACCGA
GATGACGCTGCTGTTCTGCGAGAGGCTGAAAGTCTCAAGTCTGCTGCTGAGCTGGAGGCT
GAAGAGCAGGACGCCCACAGTGCCAAGCTGCAGGAGCTCATTCGATCCGGATCTCCTCGA
GACCTCCAGGAAGCCAACCATCTCATGAAGATCATGGCTGGTTTCAAGGAATCAAAGACA
AACTACGCCGCCAAGGCCGCCGAGGATCTGGAGAAAATCAAGACTAAGGCGCAGCTTCTC
GACGAAATGATGCAGGGGCATCCCAGCGGCACCCCATTCAAGCCCGACGATGTCTACGCA
GAGATGTACTCTGCCGTCAAGGCTGCCCACCCCCGAATTCAGAAGATGACTGAGGAGGAG
GGTCAGGACGAGGAAACCGTGGCCAAGCTTCTACAACTCAACGACTACCTGCATTCTTTG
GTTGAGAAGTTTGAGCTTCTGCGAAAGGGCGACTTTGGTGGAGCTGGCGCCGTCAACACA
AAGGCCCCCTCTGGATCTGCGACCTCCAAGGCCGTTGTTTCCGACCTCATTGACTTTGGA
GACGATGAGCCTGCAGCTGGAGGAGCTGGAGGAGCGACACCCGCGGGAAACTCCGGATCT
GGCTCCGGCGCCGCCGTCGACGATCTGCTTGGCGATCTCAATGGTCTGTCCTTCAACAAC
AGCTCCGGTTTTGGTCAGGGTGGCTCCATTTCTCTGCTGGGGGCCACTAACGCAAGTAGC
GCTGCCTCCCCTGCTGTGTCCGGAGCCTCTGGAAAGCACTCTGGCACACCCGCTGGATCC
GGAAACCTTTTTGACTTGGACTTCTCTCCCTCGGCATCTCCTGCTCCTGCTGCTACTCCT
GCTCCCGCTTTCAACTTTTCTTCTCTCTCCCAGCTGACTGCCAACAAGGCCGGTGAGACA
CACGCGGTCAAGACAGCACCCTCTGAGGACCCTGCTGAGGCCTGGAACTTTGTGGGTGCT
TCTTCCGGTGCTGCTGCCGGTAAGGAGATTTCTATTCTGCAGACTGGCGACATCAAGGTG
TCTGGCCTGGTCAGCAGGTCTGGCAGTAACGTGGAGATCACTCTGCAGTTCTCCAACAAG
TCCTTCACTGATAACATTACCGCTCTGGACTTTAAGATTGCCGCTCCCAAGTCTGTCACT
CTCAAGCTAGACCCCGCATCCTCCGACACTCTTGGAGCTGCTTCCATCAACGGAGTGACC
CAAGAGGCTCACGTTGGCAACGCTGGCGACAAGCTGAAGCTGCGATTCAAGCTGAACTTC
AACATTGGAGGGAAGGCTGTTGAAGAGGTCGGCACCGTGGAGGACCTGTAAATGCAAACT
TATGCTATTAGTGCCTCTTCATGTCCGTAACGAGTAATGACTGTTAATATTTTTTTCATG
ATCCGCTCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D27192g_CDS-001

Protein length: 617 aa.
Product: Protein that regulates Arf1p, Arf2p to facilitate Golgi trafficking, putative

>YALI0D27192g_CDS-001 MADYTARFRVDDDYYVQATPRTGSGSSQSNAKLFKLISAACAPHLVEPNLALDFEVADYI
NSKKGNSARDAAQAIVKLINHQSRNVSIMALSLLDICVKNCGYPFHLQISRKEFLNELVK
KFPEKPPMNYTHTQCLILEVLQDWRETLCKHSRYKDDLGYIRDMHRLLTYKGYHFPEVNR
DDAAVLREAESLKSAAELEAEEQDAHSAKLQELIRSGSPRDLQEANHLMKIMAGFKESKT
NYAAKAAEDLEKIKTKAQLLDEMMQGHPSGTPFKPDDVYAEMYSAVKAAHPRIQKMTEEE
GQDEETVAKLLQLNDYLHSLVEKFELLRKGDFGGAGAVNTKAPSGSATSKAVVSDLIDFG
DDEPAAGGAGGATPAGNSGSGSGAAVDDLLGDLNGLSFNNSSGFGQGGSISLLGATNASS
AASPAVSGASGKHSGTPAGSGNLFDLDFSPSASPAPAATPAPAFNFSSLSQLTANKAGET
HAVKTAPSEDPAEAWNFVGASSGAAAGKEISILQTGDIKVSGLVSRSGSNVEITLQFSNK
SFTDNITALDFKIAAPKSVTLKLDPASSDTLGAASINGVTQEAHVGNAGDKLKLRFKLNF
NIGGKAVEEVGTVEDL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG